Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23i06
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1229 + 28571131-28571235,28572108-28572656,28572749-285729... 82 6e-16
12_02_0454 + 19199063-19200757,19202201-19202287 38 0.012
04_04_0871 + 28898262-28898534,28899552-28900015,28900242-289003... 37 0.016
09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419 36 0.028
01_05_0484 - 22621614-22621676,22621798-22621911,22622006-226224... 35 0.084
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 33 0.34
03_06_0146 - 31976538-31978643,31978653-31978751 33 0.34
06_03_1512 - 30688098-30688133,30688401-30688537,30688744-306888... 32 0.45
03_06_0195 + 32256771-32258792 32 0.45
08_01_0052 + 361505-361969,362270-362348,362816-362880,363069-36... 31 0.79
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 31 1.0
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 1.4
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 30 1.8
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 29 3.2
03_06_0561 + 34728428-34728439,34728529-34728615,34728729-347287... 29 4.2
08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 29 5.5
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 28 7.3
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 28 9.7
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 28 9.7
>06_03_1229 +
28571131-28571235,28572108-28572656,28572749-28572918,
28573454-28573669,28573787-28573946
Length = 399
Score = 81.8 bits (193), Expect = 6e-16
Identities = 60/214 (28%), Positives = 86/214 (40%), Gaps = 10/214 (4%)
Frame = +2
Query: 167 MTMFSCITCKVLFNTSELQREHYKLDWHRYNLKRKVASIEPVTLXXXXXXXXXXXXSQNE 346
M +C C F+ E QR HY+ +WHRYNLKRKVA + VT N
Sbjct: 1 MPTVTCNACNAGFDDEEQQRLHYRSEWHRYNLKRKVAGVPGVTEALFLARQTALAEGSNS 60
Query: 347 KQDDSQY-CQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVE 523
Y C C K + + ++ HLNS+ H + + QE + + VK
Sbjct: 61 DSTPMLYSCALCGKEYRSSKAHAQHLNSRSHLM--------KASQEPNASIAGITIVKPR 112
Query: 524 CTTGLTNERSKFVVVNTTDSGED---IETD-SEIEELDSDEWDECRIQESDSL-----IK 676
R+ V D E+ +E D SE+E + DE + D + +
Sbjct: 113 --PERVQRRAPSAVEEDEDEDEEEEWVEVDPSELESTSEMQVDEHSSKSDDEIDEFEELD 170
Query: 677 PRDCLFCVHHSKNMVKNLKHMSEAHSFFIPDVEF 778
P C C + + HM + H FFIPD E+
Sbjct: 171 PTFCFMCDLEHDTIENCMVHMHKKHGFFIPDSEY 204
>12_02_0454 + 19199063-19200757,19202201-19202287
Length = 593
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Frame = +2
Query: 347 KQDDSQYCQCCSKLFSTKNSYNNHLNSKKH--KVS-----VEKYTESQKDQENSGQSDTD 505
K+ + YC C+K F + + NH SKKH KVS E+ E+ KD E + D
Sbjct: 305 KRKEELYCVACNKKFKSDKQWKNHEQSKKHRDKVSELRMVFEEEEEALKDAEEEEPEEVD 364
Query: 506 SFVKVECTTGLTNERSKFVVVNTTDSGEDI--ETDSEIEELDSDE 634
V + +E S+F +D+ E++ E +E D +E
Sbjct: 365 --VGFDFQPAQESEESEF-----SDAAEELADELSEGLEVRDEEE 402
>04_04_0871 +
28898262-28898534,28899552-28900015,28900242-28900356,
28900510-28901157,28901282-28901374,28901658-28901795,
28902147-28902206
Length = 596
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 176 FSCITCKVLFNTSELQREHYKLDWHRYNLKRKVA 277
++C TC F + + QREH+K D HR N+K +A
Sbjct: 64 WTCNTCASEFESLQEQREHFKSDLHRLNVKLSIA 97
>09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419
Length = 396
Score = 36.3 bits (80), Expect = 0.028
Identities = 11/50 (22%), Positives = 30/50 (60%)
Frame = +2
Query: 338 QNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENS 487
+ E+++ + C+ C + + ++ NHL ++H++ V+ E+ K ++N+
Sbjct: 229 KEEEEEATWICRACQAVCTCESDLQNHLRGRRHQLKVQALPEAAKQEKNN 278
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Frame = +2
Query: 158 LHNMTMFSCITCKVLFNTSELQREHYKLDWHRYNLKRKVASIEPVTLXXXXXXXXXXXXS 337
L + +SC C+V ++ R+HY H+ KVA +E
Sbjct: 96 LFSCKTWSCAVCEVQTSSERNLRDHYGGQKHQ----SKVAGLELKAKTATVKTTAKPSPV 151
Query: 338 QNEKQDDSQY-CQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFV 514
++ +++ C C + + ++ HL K+H+ + + E + +NSG S++
Sbjct: 152 AGQRAHAARWSCSVCQVHCNGEWHFDTHLKGKRHQANTQALLE--QSNKNSGNSESHDGT 209
Query: 515 KVE 523
K +
Sbjct: 210 KAQ 212
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 344 EKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVE 451
+KQ + +C+ CS +++ +HL+ KKH +E
Sbjct: 356 DKQKATYFCEVCSLKCTSQRMLADHLSGKKHIKQLE 391
>01_05_0484 -
22621614-22621676,22621798-22621911,22622006-22622453,
22623052-22623179,22623747-22623821,22623954-22624040
Length = 304
Score = 34.7 bits (76), Expect = 0.084
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +2
Query: 365 YCQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSF-VKVECTTGLT 541
+C C ++K + +H + KKH+ + Y SQK Q+ ++ V + +
Sbjct: 95 FCSLCKTTTTSKQTLLSHADGKKHRAKAKAYHASQKQANGVEQTPKETVGAPVTESAQVN 154
Query: 542 NERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQESDSL 670
NERS N D + S+E D + Q + S+
Sbjct: 155 NERS---TENERGVDNDAAKRKRANDTTSEEPDNTKRQNNLSV 194
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 452 KYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSD 631
K E Q + N +D + +V V+ + L E S+ T+ +D+E EE D D
Sbjct: 548 KVVEEQPQEVNETINDEEEYVLVDQESQLQVEESE-----KTEPDQDVEELKPEEEEDED 602
Query: 632 EWD 640
EWD
Sbjct: 603 EWD 605
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 461 ESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWD 640
ES +++++G SD ++ + T T+E S + +TTD D + D+E + +SD +
Sbjct: 187 ESDPEEDDTGSSDLET--DSDEYTESTDEESDYEEEDTTDLESDSDEDTESTDEESDYEE 244
Query: 641 ECRIQESD 664
E +E D
Sbjct: 245 EIDDEEID 252
>06_03_1512 -
30688098-30688133,30688401-30688537,30688744-30688834,
30689265-30690815
Length = 604
Score = 32.3 bits (70), Expect = 0.45
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Frame = +2
Query: 335 SQNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFV 514
S + KQDD +L S K+ Y H +S + + ES + D +
Sbjct: 256 SAHSKQDDDAD-DGVERLVS-KHRYGRHTDSFQQGRLATESMESPLLERTLEIRDRSYKL 313
Query: 515 KVECTTG---LTNERSKFVVVNTTDSGEDIETDSEIEELDSDEWDECRIQESDSLIKPRD 685
K+E G +NE + +TT S ++I+ +S + D DE+ I+ ++ L K R+
Sbjct: 314 KIESCRGNKSQSNEAQQRPSHHTTTS-DNIDDESNAVDSDGDEFSHNVIEAAEILRKARE 372
Query: 686 CL 691
C+
Sbjct: 373 CM 374
>03_06_0195 + 32256771-32258792
Length = 673
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 461 ESQKDQENSGQSD--TDSFVKVECTTGLTNERSKFVVVNTTDSGEDIETDSEIEELDSDE 634
ES ++E+ G SD TDS +E T +E S + +TTD D + D+E E DE
Sbjct: 178 ESDPEEEDIGSSDLETDSDEYIEST----DEESDYEEEDTTDLESDSDEDTESTESSHDE 233
Query: 635 WD 640
D
Sbjct: 234 DD 235
>08_01_0052 +
361505-361969,362270-362348,362816-362880,363069-363236,
363731-364171
Length = 405
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 182 CITCKVLFNTSELQREHYKLDWHRYNLKRKVASIEPVT 295
C C VL +L REH K WH++N R + P++
Sbjct: 347 CKECDVLVE-DKLYREHCKSGWHKHNYTRHKNGLPPLS 383
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Frame = +2
Query: 179 SCITCKVLFNTSELQREHYKLDWHRYNL-------KRKVASIEPVTLXXXXXXXXXXXXS 337
+C CKV + EH HR NL K + +P S
Sbjct: 314 TCSLCKVTMTSPRALVEHRASLLHRSNLAPLRSGNKATTEAAQPAEKKTEKPEASEWNSS 373
Query: 338 QNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHK 439
+ Q+ YC C S++ +HL K+H+
Sbjct: 374 AHHHQNRMYYCDICEVRCSSEKMMASHLAGKRHR 407
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/70 (27%), Positives = 26/70 (37%)
Frame = +2
Query: 422 NSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTTDSGEDIET 601
++KK + E S + E SG +K T+G T K + E E
Sbjct: 312 DTKKGQSKDESEDSSDESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDED 371
Query: 602 DSEIEELDSD 631
DS E D D
Sbjct: 372 DSSDESSDED 381
>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 431 KHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERS 553
K K K+ ES K + GQ S V C+TG+ +E S
Sbjct: 1179 KMKAEQSKFAESMKSSGSEGQDVPMSEPDVSCSTGVVSEES 1219
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/91 (20%), Positives = 41/91 (45%)
Frame = +2
Query: 398 KNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFVKVECTTGLTNERSKFVVVNTT 577
+N Y +HL S ++ +V+K+ + ++ E +G+ V ++ + + T
Sbjct: 7 RNEYPHHLGSTNYQQAVKKWAKQDEEMEKAGKP-----VPMKNHNPRSRNWVRARTPAFT 61
Query: 578 DSGEDIETDSEIEELDSDEWDECRIQESDSL 670
G+ + D ++ E + DEC I S +
Sbjct: 62 PEGDVVFKDQKLHEARAAARDECNIYWSQKM 92
>03_06_0561 +
34728428-34728439,34728529-34728615,34728729-34728750,
34728843-34728925,34729139-34729171,34729468-34729546,
34729642-34729694,34729931-34729991,34730168-34730250,
34730418-34730513
Length = 202
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 350 QDDSQYCQCCSKLFSTKNSYNNHLNSKKHK 439
Q YC+ C + +Y +H+N KKH+
Sbjct: 78 QQAGYYCKVCECVVKDSANYLDHINGKKHQ 107
>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
Length = 124
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 158 LHNMTMFSCITCKVLFNTSELQREHYKLDWHRYNLKR 268
L M F C+ C F + ++ EHY+ H+ +K+
Sbjct: 58 LPGMGQFYCLHCDRYFASESVKEEHYRSKRHKKRIKQ 94
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 365 YCQCCSKLFSTKNSYNNHLNSKKHKVSVEK 454
YC C + F++++ H SK+HK +++
Sbjct: 65 YCLHCDRYFASESVKEEHYRSKRHKKRIKQ 94
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 368 CQCCSKLFSTKNSYNNHL 421
CQ CSK+FST S H+
Sbjct: 180 CQMCSKVFSTSGSLREHM 197
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +2
Query: 398 KNSYNNHLNSKKHKVSVEKYTESQKDQENSGQ 493
+N Y +HL S ++ +V+K+ + ++ E +G+
Sbjct: 7 RNEYPHHLGSTGYRQAVKKWAKQDEEMEKAGK 38
>04_03_0927 + 20871487-20871903,20872667-20872812,20873204-20873301,
20873378-20873572,20873670-20873797,20873892-20874050,
20875119-20875223,20875449-20875559,20875653-20875790,
20875909-20876091,20876362-20876517,20876615-20876738,
20876820-20877030,20877614-20877729,20877828-20878053,
20878218-20878311,20879198-20879275,20879822-20879971,
20880086-20880292,20880584-20880788,20880990-20881096
Length = 1117
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 106 IFQINN-KEISYFHLRRYCVLALEVEYFEGVL 14
IF N KE+ +C L LE+EYFE +L
Sbjct: 922 IFHENKTKELRMLDANGFCQLMLELEYFETIL 953
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,577,284
Number of Sequences: 37544
Number of extensions: 279810
Number of successful extensions: 869
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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