Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23i06
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      29   0.065
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    28   0.086
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    28   0.11 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              27   0.26 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    25   0.80 
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               24   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 0.065
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 356 DSQYCQCCSKLFSTKNSYNNH 418
           +S  C  C K+F T NS NNH
Sbjct: 400 NSAVCALCHKVFRTLNSLNNH 420


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 28.3 bits (60), Expect = 0.086
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 338 QNEKQDDSQYCQCCSKLFSTKNSYNNHLNSKKHKVS 445
           ++E+ D    C+ C++ + TKNS   H  S +H+ S
Sbjct: 28  KHEQSDTLYVCEFCNRRYRTKNSLTTH-KSLQHRGS 62


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 350 QDDSQYCQCCSKLFSTKNSYNNHLNS 427
           ++ +  C  C K F  KN Y +HL S
Sbjct: 58  EEKTYQCLLCQKAFDQKNLYQSHLRS 83


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +2

Query: 344 EKQDDSQYCQCCSKLFS---TKNSYNNHLNSKKHKVSVEKYTESQKDQENSGQSDTDSFV 514
           E ++   Y +C  K FS      ++N H++ +  K+ + +   +Q   E S  SDT+  +
Sbjct: 55  EDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEINQLITECSAISDTNVHL 114

Query: 515 KV 520
           K+
Sbjct: 115 KI 116


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 368 CQCCSKLFSTKNSYNNHLNSKKHKVSVEKY 457
           CQ C K+  +K S   H+ + KH    E+Y
Sbjct: 8   CQLCGKVLCSKASLKRHV-ADKHAERQEEY 36


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 587 EDIETDSEIEELDSDEWDECRIQESDSLIKPRDCL-FCVHH 706
           +DI    + E L+ D+ D     ES+ +++ R C+  C+ H
Sbjct: 22  DDITLCLKQENLNLDDIDSLLEDESERMLRKRGCIEACLFH 62


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 371 QCCSKLFSTKNSYNNH--LNSKKHKVSVEKYTESQKDQENSGQSDT 502
           Q   +LF  KN+ NN   + SKK + + E   +  ++ E   + DT
Sbjct: 137 QGLERLFDEKNAGNNKITMKSKKEQNAEEDIVDPVEENETYDEFDT 182


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 219 NSDVLNNTLQVMHENIVIL 163
           N +VLNN L + H N  IL
Sbjct: 383 NQNVLNNDLNLEHVNFQIL 401


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 447 LKNTQKVKRTKRTAVNLIQTVL 512
           L+NT+ V+R      N +QTVL
Sbjct: 353 LRNTELVERMHNKLRNALQTVL 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,037
Number of Sequences: 438
Number of extensions: 3745
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)