Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23h07
(171 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 75 9e-15
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 75 9e-15
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 75 9e-15
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 75 9e-15
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 75 9e-15
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 56 3e-09
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 40 2e-04
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 38 7e-04
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 36 0.005
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 36 0.005
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.11
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 0.58
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 27 1.8
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 27 1.8
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 2.4
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 25 7.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 25 7.2
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 25 7.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 25 7.2
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 419 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 723 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 73.3 bits (172), Expect = 2e-14
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQK+STLH+VLRLRGG
Sbjct: 799 DQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGG 836
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 74.5 bits (175), Expect = 9e-15
Identities = 33/38 (86%), Positives = 37/38 (97%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 39 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 56.0 bits (129), Expect = 3e-09
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 7 QQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 120
QQRLIFAGKQ+ D KT ADY + S LH+VL LRGG+
Sbjct: 40 QQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGGF 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 39.9 bits (89), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 111
DQQRLIF QLE+ + + YNI+ E +H+V R R
Sbjct: 199 DQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 40 EDSKTMADYNIQKESTLHM 96
+D +T++DYNI+ STL +
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 38.3 bits (85), Expect = 7e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 16 LIFAGKQLEDSKTMADYNIQKESTLHMVLR 105
L F+GK+LED ++ DYNIQK ST+ M R
Sbjct: 195 LSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 35.5 bits (78), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
++QRL +AG+QLEDS D I E+T+++ L L GG
Sbjct: 37 EEQRLCYAGRQLEDS----DCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 35.5 bits (78), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
++QRL +AG+QLEDS D I E+T+++ L L GG
Sbjct: 37 EEQRLCYAGRQLEDS----DCGIDSEATIYVNLELLGG 70
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.1 bits (67), Expect = 0.11
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 13 RLIFAGKQLEDSKTMADYNIQKESTL 90
R++ K LED T+A YNIQ+ STL
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 28.7 bits (61), Expect = 0.58
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 13 RLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 111
R++ GK LED ++A YNIQ+ + + + L+
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 1 VDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
V +Q+L+ G ++D+ + A YN+ + +++ ++ RGG
Sbjct: 614 VGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 1 VDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 117
V +Q+L+ G ++D+ + A YN+ + +++ ++ RGG
Sbjct: 614 VGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 26.6 bits (56), Expect = 2.4
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +1
Query: 1 VDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 96
V+ L + G++L+D++++ YNI + +++
Sbjct: 124 VESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 31 KQLEDSKTMADYNIQKESTL 90
K LED T+A YNI++ ST+
Sbjct: 209 KFLEDDHTLAHYNIREGSTI 228
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 7 QQRLIFAGKQLEDSKTMADYNIQKESTL 90
QQ+L KQ+E+++ +A+ N+QK L
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQL 1908
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 7 QQRLIFAGKQLEDSKTMADYNIQKESTL 90
QQ+L KQ+E+++ +A+ N+QK L
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQL 1908
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy
chain protein.
Length = 91
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 7 QQRLIFAGKQLEDSKTMADYNIQKESTL 90
QQ+L KQ+E+++ +A+ N+QK L
Sbjct: 9 QQKLKTQKKQVEEAEELANLNLQKYKQL 36
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 7 QQRLIFAGKQLEDSKTMADYNIQKESTL 90
QQ+L KQ+E+++ +A+ N+QK L
Sbjct: 1884 QQKLKTQKKQVEEAEELANLNLQKYKQL 1911
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,201,319
Number of Sequences: 27780
Number of extensions: 37934
Number of successful extensions: 157
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 37
effective length of database: 11,712,338
effective search space used: 222534422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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