Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23h02
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49436-1|AAC50572.1| 431|Homo sapiens translation initiation fa... 45 3e-04
CR456712-1|CAG32993.1| 431|Homo sapiens EIF5 protein. 45 3e-04
BX537367-1|CAD97610.1| 431|Homo sapiens hypothetical protein pr... 45 3e-04
BC107884-1|AAI07885.1| 163|Homo sapiens EIF5 protein protein. 45 3e-04
BC032866-1|AAH32866.1| 431|Homo sapiens eukaryotic translation ... 45 3e-04
BC015630-1|AAH15630.1| 166|Homo sapiens Unknown (protein for IM... 45 3e-04
BC007728-1|AAH07728.1| 431|Homo sapiens eukaryotic translation ... 45 3e-04
AK026933-1|BAB15593.1| 431|Homo sapiens protein ( Homo sapiens ... 45 3e-04
AF113615-1|AAD39906.1| 1164|Homo sapiens FH1/FH2 domain-containi... 31 5.4
BC119810-1|AAI19811.1| 179|Homo sapiens FLJ35695 protein protein. 30 9.5
BC119016-1|AAI19017.1| 179|Homo sapiens FLJ35695 protein protein. 30 9.5
AK093014-1|BAC04019.1| 179|Homo sapiens protein ( Homo sapiens ... 30 9.5
>U49436-1|AAC50572.1| 431|Homo sapiens translation initiation
factor 5 protein.
Length = 431
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>CR456712-1|CAG32993.1| 431|Homo sapiens EIF5 protein.
Length = 431
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>BX537367-1|CAD97610.1| 431|Homo sapiens hypothetical protein
protein.
Length = 431
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>BC107884-1|AAI07885.1| 163|Homo sapiens EIF5 protein protein.
Length = 163
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>BC032866-1|AAH32866.1| 431|Homo sapiens eukaryotic translation
initiation factor 5 protein.
Length = 431
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>BC015630-1|AAH15630.1| 166|Homo sapiens Unknown (protein for
IMAGE:3542638) protein.
Length = 166
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>BC007728-1|AAH07728.1| 431|Homo sapiens eukaryotic translation
initiation factor 5 protein.
Length = 431
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>AK026933-1|BAB15593.1| 431|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23280 fis, clone HEP07194. ).
Length = 431
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 644 SLNVNRNVSDAFYRYKMPRICAKV 715
S+NVNR+VSD FYRYKMPR+ AKV
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKV 25
>AF113615-1|AAD39906.1| 1164|Homo sapiens FH1/FH2 domain-containing
protein FHOS protein.
Length = 1164
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 346 RVVGVLPQEERPPAVEGA*RLTQPDIPCEEHQNFAVT 456
+++ ++P EE +EGA +L PDIP +NF +T
Sbjct: 735 KLLTMMPTEEERQKIEGA-QLANPDIPLGPAENFLMT 770
>BC119810-1|AAI19811.1| 179|Homo sapiens FLJ35695 protein protein.
Length = 179
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 294 PFYMTLARYSETSVLCAESSRCVATG---GTAASRRGCMTL 407
P Y+T+ R S V S RCV G G + RR C +L
Sbjct: 124 PSYLTVPRRSPLPVFLRPSDRCVCGGCYLGKSTRRRACQSL 164
>BC119016-1|AAI19017.1| 179|Homo sapiens FLJ35695 protein protein.
Length = 179
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 294 PFYMTLARYSETSVLCAESSRCVATG---GTAASRRGCMTL 407
P Y+T+ R S V S RCV G G + RR C +L
Sbjct: 124 PSYLTVPRRSPLPVFLRPSDRCVCGGCYLGKSTRRRACQSL 164
>AK093014-1|BAC04019.1| 179|Homo sapiens protein ( Homo sapiens
cDNA FLJ35695 fis, clone SPLEN2019709. ).
Length = 179
Score = 29.9 bits (64), Expect = 9.5
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 294 PFYMTLARYSETSVLCAESSRCVATG---GTAASRRGCMTL 407
P Y+T+ R S V S RCV G G + RR C +L
Sbjct: 124 PSYLTVPRRSPLPVFLRPSDRCVCGGCYLGKSTRRRACQSL 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,845,549
Number of Sequences: 237096
Number of extensions: 2086040
Number of successful extensions: 3412
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3412
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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