Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23g09
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095068-1|AAM11396.1|  110|Drosophila melanogaster RE14985p pro...   219   4e-57
AE014296-608|AAF47744.1|  110|Drosophila melanogaster CG17737-PA...   219   4e-57
AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro...    34   0.26 
AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p pro...    33   0.34 
AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-P...    33   0.34 
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P...    33   0.34 
U01182-1|AAC03566.1| 1256|Drosophila melanogaster flightless-I p...    30   4.2  
AF132184-1|AAD34772.1| 1256|Drosophila melanogaster unknown prot...    30   4.2  
AF017777-2|AAC28407.1| 1256|Drosophila melanogaster flightless p...    30   4.2  
AE014298-3118|AAF50830.2| 1256|Drosophila melanogaster CG1484-PA...    30   4.2  
AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-P...    30   4.2  

>AY095068-1|AAM11396.1|  110|Drosophila melanogaster RE14985p
           protein.
          Length = 110

 Score =  219 bits (535), Expect = 4e-57
 Identities = 98/110 (89%), Positives = 106/110 (96%)
 Frame = +2

Query: 137 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 316
           MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1   MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60

Query: 317 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 466
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110


>AE014296-608|AAF47744.1|  110|Drosophila melanogaster CG17737-PA
           protein.
          Length = 110

 Score =  219 bits (535), Expect = 4e-57
 Identities = 98/110 (89%), Positives = 106/110 (96%)
 Frame = +2

Query: 137 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 316
           MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1   MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60

Query: 317 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 466
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110


>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p
           protein.
          Length = 1240

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 20/77 (25%), Positives = 38/77 (49%)
 Frame = +2

Query: 95  RSVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 274
           R   ++QR+  F R ++ N ++FD F ++++  E+ V        +  RN     T +Q 
Sbjct: 576 RRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESVSQAKPSKPL-ARNNSLDDTALQK 634

Query: 275 LSSEYDLKKIVRACKKE 325
           L++    +K   A K+E
Sbjct: 635 LAAAMRYRKRDAAVKEE 651


>AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p
           protein.
          Length = 731

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 19/77 (24%), Positives = 38/77 (49%)
 Frame = +2

Query: 95  RSVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 274
           R   ++QR+  F R ++ N ++FD F ++++  E+ +        +  RN     T +Q 
Sbjct: 70  RRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQK 128

Query: 275 LSSEYDLKKIVRACKKE 325
           L++    +K   A K+E
Sbjct: 129 LAAAMRYRKRDAAVKEE 145


>AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-PC,
           isoform C protein.
          Length = 731

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 19/77 (24%), Positives = 38/77 (49%)
 Frame = +2

Query: 95  RSVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 274
           R   ++QR+  F R ++ N ++FD F ++++  E+ +        +  RN     T +Q 
Sbjct: 70  RRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQK 128

Query: 275 LSSEYDLKKIVRACKKE 325
           L++    +K   A K+E
Sbjct: 129 LAAAMRYRKRDAAVKEE 145


>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
            isoform D protein.
          Length = 1593

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 19/77 (24%), Positives = 38/77 (49%)
 Frame = +2

Query: 95   RSVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 274
            R   ++QR+  F R ++ N ++FD F ++++  E+ +        +  RN     T +Q 
Sbjct: 932  RRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSKPL-ARNNSLDDTALQK 990

Query: 275  LSSEYDLKKIVRACKKE 325
            L++    +K   A K+E
Sbjct: 991  LAAAMRYRKRDAAVKEE 1007


>U01182-1|AAC03566.1| 1256|Drosophila melanogaster flightless-I
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 693 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 785
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AF132184-1|AAD34772.1| 1256|Drosophila melanogaster unknown
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 693 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 785
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AF017777-2|AAC28407.1| 1256|Drosophila melanogaster flightless
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 693 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 785
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AE014298-3118|AAF50830.2| 1256|Drosophila melanogaster CG1484-PA
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 693 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 785
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-PA
           protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +3

Query: 144 SRISTHSTHSPMLSKARRTTFKMV*STSVSSNETGVRR*LRCKAFPRNMT*RRSCGHARR 323
           S  S+ S+ S   S+ R TT     +++V    +  RR   C+ F      R  C   R 
Sbjct: 189 SSSSSSSSSSTPSSRCRTTTTSCSANSNVCGRWSSTRR---CRRF------RNRCLMERA 239

Query: 324 SSRATVRSWSTRSTARCCS 380
           + R TV SW+  S   C S
Sbjct: 240 NCRTTVSSWNVVSLGNCSS 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,357,020
Number of Sequences: 53049
Number of extensions: 717898
Number of successful extensions: 1715
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)