Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23g03
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130... 89 3e-18
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527... 88 8e-18
09_06_0327 + 22359524-22359602,22359732-22359835,22362073-223622... 87 1e-17
08_02_0085 + 12108474-12108552,12108656-12108759,12109726-121099... 82 4e-16
04_03_0539 + 16892822-16892900,16894004-16894107,16894718-168949... 74 1e-13
04_03_0545 + 16996340-16996418,16998039-16998142,16999796-169999... 72 5e-13
04_03_0543 + 16955440-16955518,16956623-16956726,16957456-169576... 71 7e-13
07_03_0076 - 13123676-13123720,13124611-13124714,13124813-13124891 44 2e-04
07_03_0075 - 13096386-13096554,13096642-13096766,13096851-130971... 39 0.004
05_02_0072 - 6334613-6335215 34 0.10
06_03_0951 - 26269386-26269394,26269501-26269609,26272761-262731... 31 0.71
06_03_0824 + 25105450-25105482,25105649-25106485,25106580-251067... 30 2.2
05_05_0180 - 23027979-23028092,23028180-23028255,23028342-230284... 30 2.2
04_01_0184 - 2085271-2085387,2085642-2085730,2086582-2086813,208... 30 2.2
03_06_0464 + 34126930-34127065,34127149-34127333,34127444-341276... 30 2.2
01_05_0318 - 20826377-20826571,20826663-20826764,20826839-208269... 30 2.2
07_03_1171 - 24514096-24514228,24514399-24514446,24514495-245148... 29 2.9
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031... 29 3.8
05_06_0153 - 26019377-26020813 28 8.7
02_05_0515 + 29689259-29689535,29689867-29690209,29690475-296907... 28 8.7
02_01_0110 + 819022-819264,819996-820761,820846-820920,821276-82... 28 8.7
>08_02_1566 +
27909297-27909390,27909542-27909645,27912899-27913098,
27913214-27913314,27913427-27914130,27914671-27914834,
27914941-27915100
Length = 508
Score = 89.0 bits (211), Expect = 3e-18
Identities = 51/151 (33%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Frame = +3
Query: 291 NKMTEESLVRAFYSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQR 470
+++ E ++ ++ GK+ ITG TGF+G L+EKILR PDV K+YLL+R +QR
Sbjct: 4 DRLDAERIIE-YFKGKSILITGATGFLGKILVEKILRVQPDVKKIYLLVRAIDQASANQR 62
Query: 471 LE-EFPKNLVFEKLLETN----TTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVI 635
++ E + +F + E + + I +K+V ++GD+ +LGL P Q L +N++V++
Sbjct: 63 VQSEVTETELFSVVKEKHGKGFSRFIEEKVVALAGDIIYDDLGLDPPLLQHLADNLDVIV 122
Query: 636 HSAATLDFQENLRPTVRINLLGTRQVMGLCK 728
+ AAT +F ++ +N+LG + + L K
Sbjct: 123 NGAATTNFYGRYDVSLDVNVLGVKHLCQLAK 153
>07_03_0423 +
18035688-18036572,18036659-18036978,18052618-18052724,
18053001-18053104,18054129-18054328,18054422-18054522,
18054695-18054841,18055007-18055166,18055287-18055368,
18056070-18056336,18056846-18056973,18057513-18057672
Length = 886
Score = 87.8 bits (208), Expect = 8e-18
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Frame = +3
Query: 258 GKISQDTPEGRNKMT-EESLVRAFYSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLL 434
G IS E N+ + + V ++ K+ ITG TGF+G +EKILR PDV K++LL
Sbjct: 397 GTISLRNSEKSNESNMDAATVAGYFKDKSILITGSTGFLGKIFVEKILRIQPDVKKIFLL 456
Query: 435 MRPKKGKEISQR-LEEFPKNLVFEKLLETNTTDIF----KKLVPISGDVGEANLGLSPQD 599
+R QR L E N +F L E ++ + +K+ P++GD+ NLGL +
Sbjct: 457 VRAADTSSAEQRVLNEVIGNELFGPLRENYGSNFYSFMKEKISPLAGDIINENLGLESLE 516
Query: 600 RQLLIENVNVVIHSAATLDFQENLRPTVRINLLGTRQVMGLCK 728
L + ++++++ AAT +F E ++ N+LG + V K
Sbjct: 517 ILKLSKEIDIIVNGAATTNFYERYDVSLASNVLGAKYVCKFAK 559
>09_06_0327 +
22359524-22359602,22359732-22359835,22362073-22362272,
22362359-22362459,22362551-22363005,22363079-22363645
Length = 501
Score = 87.0 bits (206), Expect = 1e-17
Identities = 49/147 (33%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
Frame = +3
Query: 303 EESLVRAFYSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRLE-E 479
+E+ + ++ K+ ITG TGF+G L+EKILR PDV K+YL +R QR++ E
Sbjct: 2 DEARIIEYFKNKSILITGSTGFLGKILVEKILRVQPDVRKIYLPVRAVDAATAKQRMQTE 61
Query: 480 FPKNLVFEKLLETN----TTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAA 647
+F L E + + I +K+VP++ D+ NLGL Q L +++N++++ AA
Sbjct: 62 VIGKELFGLLKEQHGKGFQSFIDEKVVPLAADMMHQNLGLEESTLQELAKDLNIIVNGAA 121
Query: 648 TLDFQENLRPTVRINLLGTRQVMGLCK 728
T +F E + +N++G + + L K
Sbjct: 122 TTNFYERYDVALDVNVMGVKYLCQLAK 148
>08_02_0085 +
12108474-12108552,12108656-12108759,12109726-12109925,
12110003-12110103,12110184-12110379,12110584-12110745,
12110856-12110937,12111741-12112004,12113047-12113174,
12113795-12113957
Length = 492
Score = 82.2 bits (194), Expect = 4e-16
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Frame = +3
Query: 315 VRAFYSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRL-EEFPKN 491
V AF+ G++ ITG TGF+G L+EKILR PDV K+YLL+R + ++R+ +E
Sbjct: 6 VVAFFRGRSILITGSTGFLGKVLVEKILRVQPDVKKLYLLVRANDVESATRRVQDEVTGK 65
Query: 492 LVFEKLLETN----TTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDF 659
+F+ L E + + + +K+ ++GD+ NLGL L ++++++ AAT +F
Sbjct: 66 EIFQVLKEKHGDGFESFVEEKVCTLAGDIIYENLGLDSAKLTELSNEIDIIVNGAATTNF 125
Query: 660 QENLRPTVRINLLGTRQVMGLCK 728
E N+LG + + K
Sbjct: 126 YERYDVAFDSNVLGAKNICEFAK 148
>04_03_0539 +
16892822-16892900,16894004-16894107,16894718-16894917,
16896078-16896178,16897546-16897735,16898377-16898458,
16899374-16899501,16899846-16900026
Length = 354
Score = 73.7 bits (173), Expect = 1e-13
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Frame = +3
Query: 327 YSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQR-LEEFPKNLVFE 503
+ K ITG TGF+G L+EKILR P+V K+YLL+R +R L E N +F+
Sbjct: 10 FRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGNGLFD 69
Query: 504 KLLETNTTD----IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENL 671
L E I +K+ + GDV N GL D L + V+++++ AAT +F E
Sbjct: 70 VLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGAATTNFMERY 129
Query: 672 RPTVRINLLGTRQVMGLCK 728
+ N G V+ LC+
Sbjct: 130 DVALATNTTG---VVHLCQ 145
>04_03_0545 +
16996340-16996418,16998039-16998142,16999796-16999995,
17000186-17000228
Length = 141
Score = 71.7 bits (168), Expect = 5e-13
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Frame = +3
Query: 327 YSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQR-LEEFPKNLVFE 503
+ ++ ITG TGF+ L+EKILR PDV K+YLL+R +R L E +F+
Sbjct: 10 FRDRSILITGSTGFLAKMLVEKILRIQPDVRKLYLLVRAPDAAAAKERLLTEVVGKGLFD 69
Query: 504 KLLETNTTD----IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENL 671
L E + I +K+ P+ GD+ N GL + L ++V+++++ AAT +F E
Sbjct: 70 VLREQHGASFHSFIKEKVCPLPGDITHQNFGLGNSEILRLSQDVDIIVNGAATTNFMER- 128
Query: 672 RPTVRINLL 698
+ +NLL
Sbjct: 129 KVNETLNLL 137
>04_03_0543 +
16955440-16955518,16956623-16956726,16957456-16957655,
16958554-16958654,16959408-16959603,16960243-16960324,
16960402-16960668,16960790-16960917,16961285-16961465
Length = 445
Score = 71.3 bits (167), Expect = 7e-13
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Frame = +3
Query: 327 YSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQR-LEEFPKNLVFE 503
+ K ITG TGF+G L+EKILR P+V K+YLL+R +R L E +F+
Sbjct: 10 FRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGKGLFD 69
Query: 504 KLLETN----TTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENL 671
L E + I +K+ + GDV N GL + L + V+++++ AAT +F E
Sbjct: 70 VLREQYGAGFNSFIKEKIYALPGDVMHENFGLESYEVLQLSQKVDIIVNGAATTNFMERY 129
Query: 672 RPTVRINLLGTRQVMGLCK 728
+ N G VM LC+
Sbjct: 130 DVALATNAAG---VMHLCQ 145
>07_03_0076 - 13123676-13123720,13124611-13124714,13124813-13124891
Length = 75
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 327 YSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRLE 476
+ + ITG TGF+ L+EKILR P V ++YLL+R ++R+E
Sbjct: 10 FHSRTVLITGATGFIAKLLVEKILRLQPGVKRLYLLVRAADQVSANRRVE 59
>07_03_0075 -
13096386-13096554,13096642-13096766,13096851-13097117,
13097506-13097587,13097956-13098172,13098260-13098360,
13098425-13098627,13099261-13099334,13100246-13100429
Length = 473
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 540 KLVPISGDVGEANLGLSPQD-RQLLIENVNVVIHSAATLDFQENLRPTVRINLLGTRQVM 716
K+ P++GDV N G+ + + + N+++H AAT++F E + IN +G + ++
Sbjct: 111 KVFPLAGDVSLKNFGIGDARLAEDIRKETNIIVHMAATVNFAERYDTALAINTMGVKHMI 170
>05_02_0072 - 6334613-6335215
Length = 200
Score = 34.3 bits (75), Expect = 0.10
Identities = 35/141 (24%), Positives = 60/141 (42%)
Frame = +3
Query: 306 ESLVRAFYSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKKGKEISQRLEEFP 485
++ ++ + +N ITG GF+ + ++LR P V L +L+++
Sbjct: 14 DAAAASYTTPRNILITGAAGFIASHVANRLLRDHPSYRVVAL-----------DKLDDYC 62
Query: 486 KNLVFEKLLETNTTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQE 665
L L + F + GDV A+L L LL E +N V+H AA +
Sbjct: 63 ATL--NNLAPAMASPNFAF---VRGDVASADLVL----HLLLAERINTVMHFAAHTHVDD 113
Query: 666 NLRPTVRINLLGTRQVMGLCK 728
N + N+LGT ++ C+
Sbjct: 114 NSFEFTKNNVLGTHVLLEPCR 134
>06_03_0951 -
26269386-26269394,26269501-26269609,26272761-26273149,
26273592-26273852,26275067-26275245,26275329-26275467
Length = 361
Score = 31.5 bits (68), Expect = 0.71
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Frame = +3
Query: 297 MTEESLVRAFYSGKNFFITGGTGFVGLCLIEKI----------LRCIPDVGKVYLLMRPK 446
M EES R+ G +TGG GF+G L++K+ LR I D KV LL R
Sbjct: 1 MAEESGRRSG-GGVRVCVTGGAGFIGSWLVKKLLGAGYTVHATLRSIGDEVKVGLLRRLV 59
Query: 447 KGKEISQRLEEFPKNL 494
G +RL F +L
Sbjct: 60 PGDAPPERLRLFEADL 75
>06_03_0824 +
25105450-25105482,25105649-25106485,25106580-25106738,
25106830-25106886,25106971-25107202,25107338-25107638,
25107703-25107976,25108051-25108152,25108244-25108525
Length = 758
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 76 LTSFSVRPMIEVDYNR*LKIFIHLVYKIVFIVFLIGKIV 192
LT +++ ++E +NR + + +V+K FI+F++ K +
Sbjct: 188 LTIVTIQRILEKKFNRTMTVHEQIVFKTAFIIFVVTKFL 226
>05_05_0180 -
23027979-23028092,23028180-23028255,23028342-23028433,
23028689-23028790,23028865-23029138,23029203-23029503,
23029639-23029870,23029955-23030011,23030103-23030261,
23030356-23031192,23031383-23031437,23032103-23032158
Length = 784
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 76 LTSFSVRPMIEVDYNR*LKIFIHLVYKIVFIVFLIGKIV 192
LT +++ ++E +NR + + +V+K FI+F++ K +
Sbjct: 214 LTIVTIQRILEKKFNRTMTVHEQIVFKTAFIIFVVTKFL 252
>04_01_0184 -
2085271-2085387,2085642-2085730,2086582-2086813,
2086898-2086990,2087046-2087204,2087298-2088134,
2088353-2088385
Length = 519
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 76 LTSFSVRPMIEVDYNR*LKIFIHLVYKIVFIVFLIGKIV 192
LT +++ ++E +NR + + +V+K FI+F++ K +
Sbjct: 188 LTIVTIQRILEKKFNRTMTVHEQIVFKTAFIIFVVTKFL 226
>03_06_0464 +
34126930-34127065,34127149-34127333,34127444-34127632,
34128309-34128471,34129046-34129232,34129467-34129611
Length = 334
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 333 GKNFFITGGTGFVGLCLIEKIL 398
G+ +TG +GF+G CL+ ++L
Sbjct: 11 GETVLVTGASGFIGSCLVRRLL 32
>01_05_0318 -
20826377-20826571,20826663-20826764,20826839-20826973,
20827924-20828016,20828072-20828230,20828325-20828929,
20829098-20829119,20829339-20829393,20829426-20829466,
20830250-20830363
Length = 506
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 76 LTSFSVRPMIEVDYNR*LKIFIHLVYKIVFIVFLIGKIV 192
LT +++ ++E +NR + + +V+K FI+F++ K +
Sbjct: 177 LTIVTIQRILEKKFNRTMTVHEQIVFKTTFIIFVVTKFL 215
>07_03_1171 -
24514096-24514228,24514399-24514446,24514495-24514886,
24515637-24515849,24516245-24516414,24516515-24516629
Length = 356
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 330 SGKNFFITGGTGFVGLCLIEKILR 401
S + +TGG+G++ CLI+K+L+
Sbjct: 3 SSRPVCVTGGSGYIATCLIKKLLQ 26
>05_07_0059 +
27402365-27402733,27402848-27402982,27403070-27403183,
27403297-27403449,27403544-27403644,27403945-27404041,
27404542-27404651,27404775-27404878,27405129-27405308,
27405398-27405741,27405841-27405905,27405981-27406450,
27406939-27407793,27408045-27408116,27408475-27408575,
27409069-27409170,27409295-27409456,27409665-27411230,
27411384-27411602,27413924-27414198,27414291-27414596,
27414727-27415012,27415085-27415087,27415162-27415416,
27415537-27415803
Length = 2236
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 573 ANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTVRINLLGTRQVMGL 722
+ LG S D + +IE V V +++ DF+ + R +++ R+V+G+
Sbjct: 226 SGLGQSAVDTEPVIEQVFVTKSASSKADFERQMYVLRRFSVMSIREVLGV 275
>05_06_0153 - 26019377-26020813
Length = 478
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 354 RL*KSFSHYKRRGLRTLPSFYCV 286
R+ + H +R+G R LP FYCV
Sbjct: 226 RVVNTLRHARRQGGRALPPFYCV 248
>02_05_0515 +
29689259-29689535,29689867-29690209,29690475-29690746,
29691282-29691478,29691874-29692237,29692831-29692898
Length = 506
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 333 GKNFFITGGTGFVGLCLIEKILR 401
G F +TGG GFVG L ++LR
Sbjct: 11 GVRFAVTGGQGFVGSALCLELLR 33
>02_01_0110 +
819022-819264,819996-820761,820846-820920,821276-821445,
821644-821742,821835-822134,822211-822318,822443-822514,
822580-822666,822887-822958,823063-823152,823795-823902,
824015-824083,824177-824242,824395-824418
Length = 782
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = +3
Query: 270 QDTPEGRNKMTEESLVRAFYSGKNFFITGGTGFVGLCLIEKILRCIPDVGKVYLLMRPKK 449
QD +K E L+R + + K+ F++ F+G L ++ K++ M+PK+
Sbjct: 519 QDQGSMPSKEKFEDLLRTYNTEKSKFLSS---FIGQRLRVSVVLADRKSKKIFFSMKPKE 575
Query: 450 GKEISQRLEEFPKNLVFEKLLE 515
+E+ Q+ + L ++E
Sbjct: 576 SEELIQKKKSLMAKLNVGDIVE 597
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,610,536
Number of Sequences: 37544
Number of extensions: 281645
Number of successful extensions: 656
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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