Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23f23
         (144 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2P2 Cluster: NAD synthase, putative; n=6; Plasmodium...    35   0.40 
UniRef50_Q8IED3 Cluster: Putative uncharacterized protein PF13_0...    33   1.2  
UniRef50_Q9VTR8 Cluster: CG6947-PA; n=2; Drosophila melanogaster...    32   2.8  

>UniRef50_Q8I2P2 Cluster: NAD synthase, putative; n=6;
           Plasmodium|Rep: NAD synthase, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 839

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +3

Query: 12  PDLKNDNTCKLEINEQLYISSY--IAESYNCKIIICE---NKISYPKK 140
           PDL ++N C LE+NE+L+I     +     C+  IC    N IS+P K
Sbjct: 523 PDLLDNNFCSLELNEKLFIKKVKNLLIDQACRKDICNKLLNTISFPSK 570


>UniRef50_Q8IED3 Cluster: Putative uncharacterized protein
           PF13_0101; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0101 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1840

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +3

Query: 69  SSYIAESYNCKIIICENKISYPKKK 143
           SSYI   YN K+ +CE+KISY  KK
Sbjct: 46  SSYIDNVYNKKLNLCEDKISYCDKK 70


>UniRef50_Q9VTR8 Cluster: CG6947-PA; n=2; Drosophila
           melanogaster|Rep: CG6947-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 1324

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   LYVPDLKNDNTCKLEINEQLYISSYIAESYNC-KIIICENKISYPKK 140
           L  P  +  N C  E+N      +YIA S +C +  IC+ +I+YP+K
Sbjct: 85  LLAPLAEATNVCSTEVN-----GAYIANSGSCGEFYICDEQIAYPQK 126


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,489,455
Number of Sequences: 1657284
Number of extensions: 1616450
Number of successful extensions: 3914
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3914
length of database: 575,637,011
effective HSP length: 28
effective length of database: 529,233,059
effective search space used: 10055428121
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)