Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23f23
         (144 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071497-1|AAL49119.1| 1324|Drosophila melanogaster RE55745p pro...    32   0.13 
AE014296-2071|AAF49978.2| 1324|Drosophila melanogaster CG6947-PA...    32   0.13 

>AY071497-1|AAL49119.1| 1324|Drosophila melanogaster RE55745p
           protein.
          Length = 1324

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   LYVPDLKNDNTCKLEINEQLYISSYIAESYNC-KIIICENKISYPKK 140
           L  P  +  N C  E+N      +YIA S +C +  IC+ +I+YP+K
Sbjct: 85  LLAPLAEATNVCSTEVN-----GAYIASSGSCGEFYICDEQIAYPQK 126


>AE014296-2071|AAF49978.2| 1324|Drosophila melanogaster CG6947-PA
           protein.
          Length = 1324

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   LYVPDLKNDNTCKLEINEQLYISSYIAESYNC-KIIICENKISYPKK 140
           L  P  +  N C  E+N      +YIA S +C +  IC+ +I+YP+K
Sbjct: 85  LLAPLAEATNVCSTEVN-----GAYIANSGSCGEFYICDEQIAYPQK 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,392,735
Number of Sequences: 53049
Number of extensions: 68594
Number of successful extensions: 106
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 24,988,368
effective HSP length: 28
effective length of database: 23,502,996
effective search space used: 446556924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)