Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23f08
(723 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 25 0.47
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 0.82
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 1.9
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 1.9
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 22 4.4
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 5.8
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 5.8
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 5.8
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 7.6
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 7.6
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 7.6
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 7.6
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 25.4 bits (53), Expect = 0.47
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 137 SSPKRRPTCLRVD*RFCFN*LMYGYILVSFSVL 39
SS K + TCL + +C ++ IL S S+L
Sbjct: 32 SSQKGQKTCLNLSINYCICGYIFSAILFSLSIL 64
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.6 bits (51), Expect = 0.82
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 175 QRKHRRRGPSFRSSNKNVDSE 237
++K RR+GP+F+ V+SE
Sbjct: 413 EQKSRRKGPAFKVDPTQVESE 433
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 199 PSFRSSNK-NVDSEMP--IVQRQPETARRQ 279
P F S N E+P I+Q+QP+ ARR+
Sbjct: 33 PDFHESTMFNGGGEIPQNIIQQQPQQARRR 62
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.4 bits (48), Expect = 1.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 548 SLLGVFCYCILGCSVRP 498
+++ FCYC S+RP
Sbjct: 548 TIVFAFCYCYYSISIRP 564
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 392 SIENKRRLVSALSACLDPEG 451
SI N RR+V+ +ACL +G
Sbjct: 32 SILNNRRMVNYYAACLLSKG 51
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 679 YIETLLYYNYYI 714
YI +LYYNY +
Sbjct: 347 YIPAILYYNYTV 358
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 679 YIETLLYYNYYI 714
YI +LYYNY +
Sbjct: 347 YIPAILYYNYTV 358
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 679 YIETLLYYNYYI 714
YI +LYYNY +
Sbjct: 347 YIPAILYYNYTV 358
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 414 WYQHYPHA*TLKDKG 458
WYQH P T D G
Sbjct: 226 WYQHQPLLFTYTDDG 240
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory
receptor candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 87 FQLINVWLYFGEFFCFAP 34
FQL+ + G+FF P
Sbjct: 3 FQLLQIMFTIGKFFALTP 20
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 679 YIETLLYYNYYI 714
YI +LYYNY +
Sbjct: 347 YIPPILYYNYTV 358
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 679 YIETLLYYNYYI 714
YI +LYYNY +
Sbjct: 347 YIPPILYYNYTV 358
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,017
Number of Sequences: 336
Number of extensions: 4152
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -