Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23e18
(697 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 181 1e-44
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 117 2e-25
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 92 1e-17
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 81 3e-14
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 61 3e-08
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 60 4e-08
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.033
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 35 1.7
UniRef50_Q9YAH6 Cluster: Alcohol dehydrogenase; n=1; Aeropyrum p... 35 2.2
UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases... 34 2.9
UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2; Pla... 34 2.9
UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1; ... 34 3.8
UniRef50_Q19PL9 Cluster: TIR-NBS-LRR-TIR type disease resistance... 33 5.1
UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei... 33 6.7
UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas... 33 8.8
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 181 bits (441), Expect = 1e-44
Identities = 85/105 (80%), Positives = 88/105 (83%)
Frame = -1
Query: 553 PNLKKEPFDNIXXXXXXXXXXXXXXXKEKHTNTGCTRKKKIKHRQILNDKVIYLQNSNKN 374
P KKEPFDNI KEKHT+TGCTRKKKIKHRQILNDKVIYLQNSNKN
Sbjct: 161 PKFKKEPFDNILYKYSLNYKSLLLKKKEKHTSTGCTRKKKIKHRQILNDKVIYLQNSNKN 220
Query: 373 KLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGMSGC 239
KLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+RYCR+CGMSGC
Sbjct: 221 KLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIRYCRLCGMSGC 265
Score = 118 bits (284), Expect = 1e-25
Identities = 52/76 (68%), Positives = 59/76 (77%)
Frame = -3
Query: 695 LYTELYEFIERTEGVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKFKKGTFRQYSL 516
LYTELYEFIERTEGVDCCCPCQLLHKSL NT+NYV+ LNCKLFDIKPPKFKK F
Sbjct: 114 LYTELYEFIERTEGVDCCCPCQLLHKSLLNTKNYVENLNCKLFDIKPPKFKKEPFDNILY 173
Query: 515 QVFPKLQKFIVEKKGK 468
+ + +++KK K
Sbjct: 174 KYSLNYKSLLLKKKEK 189
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 117 bits (282), Expect = 2e-25
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = -2
Query: 201 MNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIY 22
MNGSWIFCMC VYPGGVCNPSFC CV SNHMW+RLKN DGDDKPCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 21 VAVVFT 4
VAV+FT
Sbjct: 51 VAVIFT 56
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 91.9 bits (218), Expect = 1e-17
Identities = 52/109 (47%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Frame = -1
Query: 553 PNLKKEPFDNIXXXXXXXXXXXXXXXKEKHTNTGCT--RKKKIKHRQILNDKVIYLQNSN 380
P KKEPFD+I KEK T GC R+KK+K RQ+L+D+VIYL N N
Sbjct: 154 PKFKKEPFDSILSKYSLNYKALCFKKKEKCT-VGCVTKRQKKMKRRQLLSDRVIYLHNKN 212
Query: 379 -----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGM 248
+ L SG SL C H + TVE QTRAGDE+ SF+RYC +C M
Sbjct: 213 DVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIRYCELCQM 261
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = -3
Query: 695 LYTELYEFIERTEGVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKFKKGTF 531
+Y EL+ FI+ G +C PC LL +S N ++V+ LNCKLFDIKPPKFKK F
Sbjct: 109 MYVELFAFIDAHGGAEC--PCLLLQQSKLNAVSFVENLNCKLFDIKPPKFKKEPF 161
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/67 (50%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Frame = -1
Query: 445 RKKKIKHRQILNDKVIY---LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF 275
+K+++K R IL D++I + +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF
Sbjct: 240 KKRRLKKRNILTDELILFKPINSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSF 299
Query: 274 LRYCRMC 254
++YC++C
Sbjct: 300 IKYCQIC 306
Score = 40.7 bits (91), Expect = 0.033
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -3
Query: 695 LYTELYEFIERTEG--VDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKFKK 540
+Y E+++ I T + CPCQ++ ++YV + K FD KPPK KK
Sbjct: 121 MYGEIFDLIHTTPEYKIKYVCPCQIMLDKRDAIQSYVDKIKTKKFDSKPPKLKK 174
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = -1
Query: 472 EKHTNTGCTRKKKIKHRQILNDKVIYLQNS--NKNKLFELSGLSLKSCRHDFVTVESQTR 299
+ H NT T K LN+ + + + ++L +SG+SL C+H+FV VE Q R
Sbjct: 220 KSHHNTTDTFVTANKKYNTLNNNSLNAAAAAADADRLHPMSGMSLNLCKHEFVVVERQLR 279
Query: 298 AGDEIASFLRYCRMCGM 248
AGDE SF+R+C+ CG+
Sbjct: 280 AGDEAVSFIRHCKRCGL 296
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -3
Query: 695 LYTELYEFIERTEGVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKFKKGTFRQYSL 516
LY EL++ I + + CPCQLL +NYV + K FD KPPK KK
Sbjct: 120 LYGELFDMINADQQLIGTCPCQLLLARREVIKNYVLLIKEKKFDTKPPKLKKDIIDNIMY 179
Query: 515 QVFPKLQKFIVEKK 474
+ + +++KK
Sbjct: 180 KYSLNWKNILLKKK 193
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = -1
Query: 559 SRP-NLKKEPFDNIXXXXXXXXXXXXXXXKEKHTNTGCTRKKKIKHRQILND-KVIYLQN 386
S+P LKKEP D+I +K + T KK + ++ +++ +V +
Sbjct: 137 SKPCKLKKEPIDSILFKYSINWKNSLN---KKRSLPKSTTTKKSEEKENMDEIEVDASKI 193
Query: 385 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCG 251
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF+++C+ CG
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKFCKKCG 238
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -3
Query: 686 ELYEFIERTEGVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKFKK 540
+LYE + + D CPC+L+ L + Y ++L K FD KP K KK
Sbjct: 96 KLYEDLIKLMNGDDKCPCELITARLNDNIAYNESLKNKNFDSKPCKLKK 144
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.033
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 42 MVYRRRRRSSTGATYGLT 95
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2
Query: 240 VNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVC 127
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_Q9YAH6 Cluster: Alcohol dehydrogenase; n=1; Aeropyrum
pernix|Rep: Alcohol dehydrogenase - Aeropyrum pernix
Length = 390
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 439 KKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCR 260
K +KH ++ D + + K + ++ L ++ C D VT E + GD IAS R CR
Sbjct: 27 KGVKHVLVVTDGKVAAMSWFKEAVEHVASLGVEVCIFDGVTPEPEFDVGDAIASEARRCR 86
>UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases,
including glyoxylases; n=1; Brevibacterium linens
BL2|Rep: COG0491: Zn-dependent hydrolases, including
glyoxylases - Brevibacterium linens BL2
Length = 255
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 55 AVVVLQPVPHMV*HAGAVLQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHAT 234
+ VV+ P P M H A L V+ D A V D H+E G++ A EV +A
Sbjct: 28 SAVVIDPGPEMADHCQAFLAEVADRDLTAIVLTHQHAD--HSEMLGSIEQWAPEVPVYAV 85
Query: 235 INSQTFHTSDSSEG 276
+ HT ++G
Sbjct: 86 LERFARHTEPVADG 99
>UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2;
Plasmodium (Vinckeia)|Rep: Putative transcription factor
- Plasmodium yoelii yoelii
Length = 383
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 409 DKVIYLQNSNKNKLFELSGLSLKSCRHDFVT-VESQTRAGDEIASFLRYCRMC 254
DK + L +N + ++ C HDF+ V QTR+ DE ++ + YC C
Sbjct: 323 DKNVELFKEGENGAYNITYEKCTDCDHDFLYFVNIQTRSADEGSTIIYYCPNC 375
>UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1;
Tetrahymena thermophila SB210|Rep: transcription factor
S-II - Tetrahymena thermophila SB210
Length = 356
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 445 RKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCRHD--FVTVESQTRAGDEIASFL 272
+KK ++ + +D Y N + +L L G K C+ F+ E QTR+ DE +
Sbjct: 286 QKKAVEDQLATSDPDFY-NNMRRQRLQGLEGELCKGCKKKTAFLVKELQTRSSDEPMTRF 344
Query: 271 RYCRMCGMS 245
C CG S
Sbjct: 345 MECNSCGKS 353
>UniRef50_Q19PL9 Cluster: TIR-NBS-LRR-TIR type disease resistance
protein; n=48; core eudicotyledons|Rep: TIR-NBS-LRR-TIR
type disease resistance protein - Populus trichocarpa
(Western balsam poplar) (Populus balsamiferasubsp.
trichocarpa)
Length = 1524
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 644 CCPCQLLHKSLFNTRN--YVKTLNCKLFDIKPPKFKKGTFRQYSLQVFPKLQKF 489
C +H SL +N YV +NCK F I P + + + ++L KL+KF
Sbjct: 750 CTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLKVFTLDGCTKLEKF 803
>UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei
subsp. sakei 23K|Rep: DNA primase G - Lactobacillus
sakei subsp. sakei (strain 23K)
Length = 627
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 109 LQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQ 246
L+ +S +A +V D A V LA + P AVH +++EVT+ + Q
Sbjct: 77 LEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLYQQ 122
>UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas
atlantica T6c|Rep: NUDIX hydrolase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 271
Score = 32.7 bits (71), Expect = 8.8
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -1
Query: 412 NDKVIYLQNSNKNKLFELSGLSLKSCR----HDFVTVESQTRAGDEIASFLRYCRMCGMS 245
N +V YL + N+L E +GL L R HD + + S ++A FLR R CG
Sbjct: 58 NGQVCYLVDMG-NELIEQAGLQLSHLRSLLLHDEMDIFSVAARAWQVALFLRTHRFCGQC 116
Query: 244 G 242
G
Sbjct: 117 G 117
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,866,457
Number of Sequences: 1657284
Number of extensions: 12517151
Number of successful extensions: 33151
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 31972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33136
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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