Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23e15
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 356 8e-99
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 356 8e-99
AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical... 54 8e-08
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.039
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 34 0.090
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 32 0.36
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 32 0.36
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 31 1.1
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.5
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 30 1.5
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 30 1.5
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 29 2.6
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 29 2.6
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 29 2.6
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 29 3.4
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 356 bits (876), Expect = 8e-99
Identities = 153/215 (71%), Positives = 189/215 (87%)
Frame = +3
Query: 81 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 260
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 261 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 440
L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63 LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122
Query: 441 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGK 620
SLYRCK LKRAALGRM ++KRQ ++ YLEQVRQHL+RLPSIDP TRT+I+CGFPNVGK
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGK 182
Query: 621 SSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLR 725
SSFIN +TRADVEVQPYAFTTK+LYVGH DY++LR
Sbjct: 183 SSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLR 217
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 356 bits (876), Expect = 8e-99
Identities = 153/215 (71%), Positives = 189/215 (87%)
Frame = +3
Query: 81 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 260
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 261 LSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 440
L++II EFPK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY D
Sbjct: 63 LTQIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYAD 122
Query: 441 SLYRCKQLKRAALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGK 620
SLYRCK LKRAALGRM ++KRQ ++ YLEQVRQHL+RLPSIDP TRT+I+CGFPNVGK
Sbjct: 123 SLYRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGK 182
Query: 621 SSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLR 725
SSFIN +TRADVEVQPYAFTTK+LYVGH DY++LR
Sbjct: 183 SSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLR 217
>AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical
protein T07A9.9c protein.
Length = 53
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 426 LKYGDSLYRCKQLKRAALGRMATIMKRQGANLTYLE 533
+KY DSLYRCK LKRAALGRM ++KRQ ++ YL+
Sbjct: 1 MKYADSLYRCKMLKRAALGRMVKLLKRQKSSFEYLK 36
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK 716
+ GFPN GKSS + I+RA +V Y FTT ++G Y+
Sbjct: 193 LVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYE 233
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITRADVEVQPYAFTT 683
I G PNVGKS+F N +T+++ + + + F T
Sbjct: 26 ILGLPNVGKSTFFNVLTKSEAQAENFPFCT 55
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 588 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDY 713
+ + GFP+VGKS+ ++ +T E Y FTT + G Y
Sbjct: 65 VAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISY 106
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK 716
GFP+VGKS+ + + EV Y FTT + G YK
Sbjct: 69 GFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYK 107
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK 716
GFP+VGKS+ + + EV Y FTT + G YK
Sbjct: 69 GFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYK 107
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 594 ICGFPNVGKSSFINK-ITRADVEVQPYAFTT 683
+ GFPN GKS+ + + V++ YAFTT
Sbjct: 166 LLGFPNAGKSTLLKALVPEKSVKIADYAFTT 196
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +3
Query: 153 TQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNV 332
T T + HK + + G + Q+F + R FP L + F +++ +
Sbjct: 124 TYPTTELLGHKILLANNLYGVETHPKTHRIQSFSAVILRFFLTFPNLKPMTDFEHEIVKL 183
Query: 333 LYDKDHYKLGLGQLNTARHLIDNVAKDYVRLL 428
+YD Y L GQ+ + DN+ + VR L
Sbjct: 184 VYDSGKYPLIYGQVAS-----DNLVAEEVRRL 210
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 594 ICGFPNVGKSSFINKITR 647
+ GFPNVGKSS IN + R
Sbjct: 264 VVGFPNVGKSSVINSLKR 281
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 546 HLARLPSIDPYTRTIIICGFPNVGKSSFINKI 641
H++ PS P ++ G+PNVGKSS INK+
Sbjct: 120 HVSDEPSAKPVMVGMV--GYPNVGKSSTINKL 149
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 546 HLARLPSIDPYTRTIIICGFPNVGKSSFINKI 641
H++ PS P ++ G+PNVGKSS INK+
Sbjct: 120 HVSDEPSAKPVMVGMV--GYPNVGKSSTINKL 149
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 546 HLARLPSIDPYTRTIIICGFPNVGKSSFINKI 641
H++ PS P ++ G+PNVGKSS INK+
Sbjct: 289 HVSDEPSAKPVMVGMV--GYPNVGKSSTINKL 318
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADV-EVQPYAFTTK 686
G+PNVGKSS +N + + V + P A TK
Sbjct: 332 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 361
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADV-EVQPYAFTTK 686
G+PNVGKSS +N + + V + P A TK
Sbjct: 273 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 302
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 600 GFPNVGKSSFINKITRADV-EVQPYAFTTK 686
G+PNVGKSS +N + + V + P A TK
Sbjct: 332 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 361
>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
protein F47A4.5 protein.
Length = 1071
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 279 EFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDN 401
+FPK + Y D+++ D +H+ + G++ T HL+DN
Sbjct: 256 QFPKAELA---YYDIVSTDVDDEHFVIVAGKVTTDEHLMDN 293
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,367,217
Number of Sequences: 27780
Number of extensions: 379763
Number of successful extensions: 965
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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