Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23e09
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 202 2e-52
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 116 1e-26
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 103 9e-23
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 101 4e-22
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 95 4e-20
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 93 1e-19
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 93 1e-19
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 91 5e-19
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 91 5e-19
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 91 5e-19
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 89 2e-18
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 89 2e-18
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 87 8e-18
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 87 1e-17
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 83 1e-16
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 83 1e-16
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 82 3e-16
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 82 3e-16
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 82 4e-16
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 82 4e-16
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 80 2e-15
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 79 4e-15
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 79 4e-15
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 79 4e-15
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 76 2e-14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 76 2e-14
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 2e-13
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 8e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 8e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 8e-13
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 70 1e-12
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 66 2e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 64 9e-11
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 52 3e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 50 2e-06
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 5e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 36 0.027
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.046
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 34 0.11
AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical ... 33 0.19
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 33 0.25
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 33 0.25
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.33
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 28 5.3
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 28 5.3
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 28 5.3
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 28 5.3
Z93388-12|CAB07661.2| 294|Caenorhabditis elegans Hypothetical p... 28 7.0
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 27 9.3
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 9.3
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 9.3
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 27 9.3
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 202 bits (493), Expect = 2e-52
Identities = 101/210 (48%), Positives = 137/210 (65%), Gaps = 3/210 (1%)
Frame = +1
Query: 55 KRNFTMKQEEKDPKAQRGXXXXXXXXXXXXXSFEEDAAIKYLQGQYEKINPDDIRTF--- 225
KRNF +Q+ KA + +E+ + ++ +Y+++ RTF
Sbjct: 21 KRNFDGEQDPSVRKALKEKRLLKKRKQDLKG--QEETMLDEVEQKYQEMLKKSSRTFLRF 78
Query: 226 KDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENL 405
+DFPLS +TL GLK N+Y PTEIQ+ I Y+L G D++GAAKTGSGKTLA +IP+LE L
Sbjct: 79 EDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEAL 138
Query: 406 FCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQI 585
+ KW+ G+GAL+ISPTRELA Q + T+ +G H FS GL+IGG ++ FER R+ I
Sbjct: 139 WRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRISGI 198
Query: 586 NILICTPGRLLQHMDENPLFDCSHLQIVVL 675
NI++CTPGRLLQHMDEN C LQ++VL
Sbjct: 199 NIIVCTPGRLLQHMDENAQMSCDSLQVLVL 228
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 116 bits (280), Expect = 1e-26
Identities = 55/142 (38%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Frame = +1
Query: 253 LNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLD 432
L ++ + T TEIQ ++I L+GKD+L +AKTGSGKTLAFL+P +E L W + +
Sbjct: 80 LKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHN 139
Query: 433 GVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPG 609
G G +++SPTREL+ Q Y L ++ + + GL++GG N E+ ++ + ++IL+ TPG
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPG 199
Query: 610 RLLQHMDENPLFDCSHLQIVVL 675
RLL H+ F +++ +++
Sbjct: 200 RLLDHLQNTDNFLVRNMKCLII 221
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 103 bits (248), Expect = 9e-23
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = +1
Query: 220 TFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILE 399
+F+ LS++ L Y PT IQ+ I AL GKDI A TG+GKT AF++PILE
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 400 NLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRM- 576
+ + LV+ PTRELA Q+++ RK+ F L GG +LK + +
Sbjct: 209 RMIYRP-KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 577 DQINILICTPGRLLQHMDENPLFDCSHLQI 666
++++ TPGRL+ H+ +P F+ S++++
Sbjct: 268 SGPDVVVATPGRLIDHLHNSPSFNLSNIEV 297
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 101 bits (243), Expect = 4e-22
Identities = 55/171 (32%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Frame = +1
Query: 172 KYLQGQYEKINPDDIR--TFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILG 345
K + + EK + +D++ +F + +SQ + + ++ P++IQ+ A+ +ALQGKD++G
Sbjct: 27 KVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIG 86
Query: 346 AAKTGSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFS 525
A+TGSGKT AF IP+L++L LV++PTRELA+QI + +G
Sbjct: 87 LAETGSGKTGAFAIPVLQSLL----DHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLI 142
Query: 526 AGLIIGGQNLKFERKRM-DQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
A +I+GG ++ + + + +I++ TPGRL+ H++ F+ L+ +++
Sbjct: 143 AAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIM 193
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 95.1 bits (226), Expect = 4e-20
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 2/146 (1%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P I+T+ ++ K +N LK Y PT IQ QAI + G+D++G AKTGSGKTLAFL
Sbjct: 300 PKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFL 359
Query: 385 IPILENLFCK-KWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKF 561
+P+ ++ + + DG A++++PTRELA Q Y+ K GG +
Sbjct: 360 LPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISE 419
Query: 562 ERKRMDQ-INILICTPGRLLQHMDEN 636
+ + + I++CTPGR++ + N
Sbjct: 420 QIADLKRGAEIVVCTPGRMIDVLAAN 445
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 93.5 bits (222), Expect = 1e-19
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = +1
Query: 238 LSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKK 417
L ++ + PT IQ++ I + GKD++ ++TGSGKT AF+IP+L+ L +
Sbjct: 31 LDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRD 90
Query: 418 WTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRM-DQINIL 594
T G+ AL++SPTRELA Q ++ ++++G F ++GG ++ + + + +IL
Sbjct: 91 TT---GIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDIL 147
Query: 595 ICTPGRLLQHMDENPLFDCSHLQIVV 672
+ TPGRLL + E L S++Q VV
Sbjct: 148 LATPGRLLHVIVEMDL-RLSYVQYVV 172
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 93.5 bits (222), Expect = 1e-19
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Frame = +1
Query: 238 LSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKK 417
L ++ + PT IQ++ I + GKD++ ++TGSGKT AF+IP+L+ L +
Sbjct: 31 LDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRD 90
Query: 418 WTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRM-DQINIL 594
T G+ AL++SPTRELA Q ++ ++++G F ++GG ++ + + + +IL
Sbjct: 91 TT---GIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDIL 147
Query: 595 ICTPGRLLQHMDENPLFDCSHLQIVV 672
+ TPGRLL + E L S++Q VV
Sbjct: 148 LATPGRLLHVIVEMDL-RLSYVQYVV 172
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 91.5 bits (217), Expect = 5e-19
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
Frame = +1
Query: 151 FEEDAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQG 330
F ED I G+ P +R +++ + +K Y+ PT IQ+QAI LQ
Sbjct: 283 FREDFNISIKGGRV----PRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQN 338
Query: 331 KDILGAAKTGSGKTLAFLIPILENL-FCKKWTRLD----GVGALVISPTRELAYQIYETL 495
+D++G A+TGSGKT AFL+P+L + K R + G A++++PTRELA QI E
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 496 RKIGHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
K G +IGG + + + ++ + ++I TPGRLL ++ L
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYL 448
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 91.5 bits (217), Expect = 5e-19
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 196 KINPDDIRT--FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGK 369
+I+ D++ T F + L+ T T +Q I L+G DILG A+TG+GK
Sbjct: 80 QISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Query: 370 TLAFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQ 549
TLAF IPIL+ L + G+ AL+++PTRELA+QI E +G +I+GG+
Sbjct: 140 TLAFAIPILQKLSVDPY----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGR 195
Query: 550 NLKFE-RKRMDQINILICTPGRLLQHMDENP 639
+L + R+ ++ ++++ TPGRL ++ +P
Sbjct: 196 SLIHQARELSERPHVVVATPGRLADLIESDP 226
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 91.5 bits (217), Expect = 5e-19
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 196 KINPDDIRT--FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGK 369
+I+ D++ T F + L+ T T +Q I L+G DILG A+TG+GK
Sbjct: 80 QISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Query: 370 TLAFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQ 549
TLAF IPIL+ L + G+ AL+++PTRELA+QI E +G +I+GG+
Sbjct: 140 TLAFAIPILQKLSVDPY----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGR 195
Query: 550 NLKFE-RKRMDQINILICTPGRLLQHMDENP 639
+L + R+ ++ ++++ TPGRL ++ +P
Sbjct: 196 SLIHQARELSERPHVVVATPGRLADLIESDP 226
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/167 (30%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = +1
Query: 178 LQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKT 357
++G Y+++ + +F D L ++ L G+ + P+ IQK+AI GKD++ A++
Sbjct: 20 IEGNYDQV----VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQS 75
Query: 358 GSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLI 537
G+GKT F + IL+ + + V ALV++PTRELA QI + + +G + + +
Sbjct: 76 GTGKTATFSVSILQRIDHED----PHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPC 131
Query: 538 IGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPLFDCSHLQIVVL 675
IGG +++ ++++++ I++++ TPGR+ ++ N L D S +++ VL
Sbjct: 132 IGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNAL-DTSRIKMFVL 177
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/167 (30%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = +1
Query: 178 LQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKT 357
++G Y+++ + +F D L ++ L G+ + P+ IQK+AI GKD++ A++
Sbjct: 20 IEGNYDQV----VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQS 75
Query: 358 GSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLI 537
G+GKT F + IL+ + + V ALV++PTRELA QI + + +G + + +
Sbjct: 76 GTGKTATFSVSILQRIDHED----PHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPC 131
Query: 538 IGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPLFDCSHLQIVVL 675
IGG +++ ++++++ I++++ TPGR+ ++ N L D S +++ VL
Sbjct: 132 IGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNAL-DTSRIKMFVL 177
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 87.4 bits (207), Expect = 8e-18
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = +1
Query: 223 FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILEN 402
F+DF L + L G+ + P+ IQ+ +IG AL G+DIL AK G+GKT A+ IP++E
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIE- 103
Query: 403 LFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMD- 579
K L + A+VI PTRELA Q + ++ + GG +L+ + R++
Sbjct: 104 ---KIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNG 160
Query: 580 QINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
++++I TPGR+L M E + H + +VL
Sbjct: 161 TVHLVIATPGRILDLM-EKGVAKMEHCKTLVL 191
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 86.6 bits (205), Expect = 1e-17
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Frame = +1
Query: 217 RTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPIL 396
+TF DF L ++ L + + ++Q+ I AL+ K+I+G A+TGSGKT AFLIP++
Sbjct: 89 KTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
Query: 397 ENLFCKKWTRLDGVG--ALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERK 570
+ L + T VG A++I+PT+EL QIY+ K+ F + + N +
Sbjct: 149 QKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSV 208
Query: 571 RM-DQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
+ D+ ++++ TPG+LL+ P + C+ + +V+
Sbjct: 209 WLEDRSHVVVTTPGKLLRMCSLRPEY-CTLVSYLVM 243
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 85.8 bits (203), Expect = 3e-17
Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P + +F F + + ++ + Y PT IQ AI AL G+D+LG AKTGSGKT A+L
Sbjct: 261 PRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYL 320
Query: 385 IPILENLFCKKWTRL-DGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKF 561
P + ++ + + +G A+++ PTRELA Q+++ +K ++ + GG + K+
Sbjct: 321 WPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGS-KW 379
Query: 562 ERK---RMDQINILICTPGRLL 618
E+ + + +++CTPGR++
Sbjct: 380 EQSNELQNEGAEMVVCTPGRII 401
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 83.4 bits (197), Expect = 1e-16
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P I F D L + +K Y PT +QK +I G+D++ A+TGSGKT AFL
Sbjct: 162 PQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFL 221
Query: 385 IPILENLF-------CKKWTRLDG-----VGALVISPTRELAYQIYETLRKIGHFHDFSA 528
+P++ + + T G ALV+SPTREL+ QI+ RK + ++
Sbjct: 222 VPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITS 281
Query: 529 GLIIGG-QNLKFE-RKRMDQINILICTPGRLLQHMDE 633
L+ GG +N K + K +ILI TPGRL+ MD+
Sbjct: 282 ALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQ 318
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 83.4 bits (197), Expect = 1e-16
Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGL-KANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAF 381
P I +F + + L + K VTPT IQ Q I AL G+D++G A TGSGKT+ F
Sbjct: 185 PPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTF 244
Query: 382 LIPI----LENLFCKKWTRLDGVGALVISPTRELAYQI-------YETLRKIGHFHDFSA 528
++P+ LE + R +G L+I P+RELA QI ++ L K G + A
Sbjct: 245 VLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAG-LPEMRA 303
Query: 529 GLIIGGQNLKFERKRM-DQINILICTPGRL 615
GL IGG + + K + D I+I++ TPGRL
Sbjct: 304 GLCIGGVPIGEQAKDVRDGIHIVVATPGRL 333
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 82.2 bits (194), Expect = 3e-16
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Frame = +1
Query: 220 TFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILE 399
TF+ + QKTL LK + + P+ +Q +AI L G+D+L AK+G+GKTL F + +E
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 400 NLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMD 579
NL +R + ++++PTRE++ QI ET+RK+ + +GG K +
Sbjct: 83 NLD----SRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLK 137
Query: 580 QI--NILICTPGRLLQHMDENPLFDCSHLQIVVL 675
Q I+I TPGR+ Q + + + SH+ VL
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAM-NMSHVDFFVL 170
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 82.2 bits (194), Expect = 3e-16
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Frame = +1
Query: 220 TFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILE 399
TF+ + QKTL LK + + P+ +Q +AI L G+D+L AK+G+GKTL F + +E
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 400 NLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMD 579
NL +R + ++++PTRE++ QI ET+RK+ + +GG K +
Sbjct: 83 NLD----SRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLK 137
Query: 580 QI--NILICTPGRLLQHMDENPLFDCSHLQIVVL 675
Q I+I TPGR+ Q + + + SH+ VL
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAM-NMSHVDFFVL 170
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 81.8 bits (193), Expect = 4e-16
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P + F + PL + ++ L + PT IQ + A+ G+DI+ AKTGSGKTLAF+
Sbjct: 126 PRPVFEFNEAPLPGQ-IHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFM 184
Query: 385 IPILENLFCKKW-TRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKF 561
+P L ++ + R +G LV+ PTRELA Q+ E H + GG +
Sbjct: 185 LPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGP 244
Query: 562 ERKRMDQ-INILICTPGRLLQHMDENP--LFDCSHL 660
+ + +++ ++I++ TPGRLL +D + CS+L
Sbjct: 245 QARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYL 280
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 81.8 bits (193), Expect = 4e-16
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +1
Query: 160 DAAIKYL-QGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKD 336
DA+++ + +GQ I P ++F D + Q ++ Y T IQ+ + GKD
Sbjct: 280 DASVQLVSRGQPVTIQP--CKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKD 337
Query: 337 ILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRK 501
IL A+TGSGKT AFL+PI+ L +K G ++++PTRELA QIY RK
Sbjct: 338 ILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRK 397
Query: 502 IGHFHDFSAGLIIGGQNLKFERKR-MDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
+ + GG N+ + + + M I++ T GR ++H E+ + +VL
Sbjct: 398 FSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGR-VKHFCEDGAIKLDKCRYLVL 455
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 81.8 bits (193), Expect = 4e-16
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +1
Query: 160 DAAIKYL-QGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKD 336
DA+++ + +GQ I P ++F D + Q ++ Y T IQ+ + GKD
Sbjct: 280 DASVQLVSRGQPVTIQP--CKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKD 337
Query: 337 ILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRK 501
IL A+TGSGKT AFL+PI+ L +K G ++++PTRELA QIY RK
Sbjct: 338 ILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRK 397
Query: 502 IGHFHDFSAGLIIGGQNLKFERKR-MDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
+ + GG N+ + + + M I++ T GR ++H E+ + +VL
Sbjct: 398 FSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGR-VKHFCEDGAIKLDKCRYLVL 455
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 80.2 bits (189), Expect = 1e-15
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P+ I F D +S LN L N+ P+ IQ Q+I + + +++L +A TGSGKTLAF
Sbjct: 122 PNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFA 181
Query: 385 IPILENLFCKKW------TRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGG 546
+P+++ + K + + A+V+ PTRELA Q Y F + A I
Sbjct: 182 LPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYT------EFLKYCANTSISA 235
Query: 547 QNLKFERKRMDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
N E + +IL+ TP R++ H+D+ D S L+ +V+
Sbjct: 236 ANFSGEETDIQHADILVSTPNRIVFHLDK---IDTSSLRWLVV 275
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 80.2 bits (189), Expect = 1e-15
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = +1
Query: 214 IRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPI 393
I TF L + L G+ A + P+ IQ++AI L+ +D++ A++G+GKT F I +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 394 LENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKR 573
L++L T++ AL++SPTRELA QI + + +G + + IGG NL + ++
Sbjct: 85 LQSLD----TQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRK 140
Query: 574 MDQ-INILICTPGRL 615
+D +++ TPGR+
Sbjct: 141 LDYGQHVVSGTPGRV 155
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = +1
Query: 214 IRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPI 393
I TF L + L G+ A + P+ IQ++A+ L+ +D++ A++G+GKT F I +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 394 LENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKR 573
L++L T++ AL++SPTRELA QI + + +G + + IGG NL + ++
Sbjct: 85 LQSLD----TQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRK 140
Query: 574 MDQ-INILICTPGRL 615
+D +++ TPGR+
Sbjct: 141 LDYGQHVVSGTPGRV 155
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P I F + + + + Y PT +QK +I L +D++ A+TGSGKT AFL
Sbjct: 135 PAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFL 194
Query: 385 IPILENLFC-----------KKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAG 531
+PI++++ R ALV+SPTRELA QI++ K + +
Sbjct: 195 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTA 254
Query: 532 LIIGG-QNLKFERKRMDQ-INILICTPGRLLQHMDE 633
++ GG +N + + R+ +ILI TPGRL+ +++
Sbjct: 255 ILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQ 290
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P I F + + + + Y PT +QK +I L +D++ A+TGSGKT AFL
Sbjct: 119 PAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFL 178
Query: 385 IPILENLFC-----------KKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAG 531
+PI++++ R ALV+SPTRELA QI++ K + +
Sbjct: 179 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTA 238
Query: 532 LIIGG-QNLKFERKRMDQ-INILICTPGRLLQHMDE 633
++ GG +N + + R+ +ILI TPGRL+ +++
Sbjct: 239 ILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQ 274
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Frame = +1
Query: 205 PDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFL 384
P I F + + + + Y PT +QK +I L +D++ A+TGSGKT AFL
Sbjct: 116 PAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFL 175
Query: 385 IPILENLFC-----------KKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAG 531
+PI++++ R ALV+SPTRELA QI++ K + +
Sbjct: 176 LPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTA 235
Query: 532 LIIGG-QNLKFERKRMDQ-INILICTPGRLLQHMDE 633
++ GG +N + + R+ +ILI TPGRL+ +++
Sbjct: 236 ILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQ 271
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 77.0 bits (181), Expect = 1e-14
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Frame = +1
Query: 211 DIRTFKDFP-LSQKTLNGLKANNYVTPTEIQKQAIGYALQGK-DILGAAKTGSGKTLAFL 384
DI +K F L + L ++ + PTEIQ + A++ + D+LGAA+TGSGKTLAF
Sbjct: 152 DISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFG 211
Query: 385 IPILENLFCK-------KWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIG 543
IP++ L + T + G AL+++PTREL QI + + + A I+G
Sbjct: 212 IPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVG 271
Query: 544 G-QNLKFERKRMDQ-INILICTPGRLLQHMDE 633
G +K ER Q +I++ TPGRL M E
Sbjct: 272 GLAQVKQERIISQQRPDIVVATPGRLWAMMQE 303
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Frame = +1
Query: 196 KINPDDIRTFKDFPLSQKTLN-GLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKT 372
K+ D+ +F F + + L+ LK PT IQ+ + + G D++ A TGSGKT
Sbjct: 728 KVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKT 787
Query: 373 LAFLIPILENL---FCKKWTRLD---GVGALVISPTRELAYQIYETLRKIGHFHDFSAGL 534
LAFLIP + L F K D L+++PTREL Q + T R++ + GL
Sbjct: 788 LAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGL 847
Query: 535 IIGG--QNLKFERKR-MDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
GG +N + R Q+NIL+ T GRL ++ + S ++ +VL
Sbjct: 848 AFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEV-SLSKMKYIVL 896
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Frame = +1
Query: 196 KINPDDIRTFKDFPLSQKTLN-GLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKT 372
K+ D+ +F F + + L+ LK PT IQ+ + + G D++ A TGSGKT
Sbjct: 728 KVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKT 787
Query: 373 LAFLIPILENL---FCKKWTRLD---GVGALVISPTRELAYQIYETLRKIGHFHDFSAGL 534
LAFLIP + L F K D L+++PTREL Q + T R++ + GL
Sbjct: 788 LAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGL 847
Query: 535 IIGG--QNLKFERKR-MDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
GG +N + R Q+NIL+ T GRL ++ + S ++ +VL
Sbjct: 848 AFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEV-SLSKMKYIVL 896
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 74.5 bits (175), Expect = 6e-14
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Frame = +1
Query: 196 KINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTL 375
K+ P ++TF++ L + L +Y + T++Q + + L D++ + TGSGKTL
Sbjct: 4 KVGPVALKTFRE-KLGPELLEVFD-KSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTL 61
Query: 376 AFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNL 555
AF++P++ + K D +GAL++SP+REL QI ++ + + + GGQ +
Sbjct: 62 AFVLPMMRMIQNAKLQPAD-IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKV 120
Query: 556 KFERK--RMDQINILICTPGRLLQ 621
K + +NIL+ TPGRL Q
Sbjct: 121 DKNIKMFKNKNVNILVATPGRLFQ 144
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Frame = +1
Query: 160 DAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDI 339
DA +K L + + +TF + L++ + Y T IQ+ A+ QG DI
Sbjct: 323 DAEVK-LTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDI 381
Query: 340 LGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRKI 504
+ A+TGSGKT AFL+PI+ L G G ++++PTRELA QIY RK
Sbjct: 382 MACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Query: 505 GHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
+ + GG + + + ++++ I++ T GR+ +E +
Sbjct: 442 AYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTI 488
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Frame = +1
Query: 160 DAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDI 339
DA +K L + + +TF + L++ + Y T IQ+ A+ QG DI
Sbjct: 323 DAEVK-LTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDI 381
Query: 340 LGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRKI 504
+ A+TGSGKT AFL+PI+ L G G ++++PTRELA QIY RK
Sbjct: 382 MACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Query: 505 GHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
+ + GG + + + ++++ I++ T GR+ +E +
Sbjct: 442 AYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTI 488
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Frame = +1
Query: 160 DAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDI 339
DA +K L + + +TF + L++ + Y T IQ+ A+ QG DI
Sbjct: 323 DAEVK-LTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDI 381
Query: 340 LGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRKI 504
+ A+TGSGKT AFL+PI+ L G G ++++PTRELA QIY RK
Sbjct: 382 MACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Query: 505 GHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
+ + GG + + + ++++ I++ T GR+ +E +
Sbjct: 442 AYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTI 488
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 70.9 bits (166), Expect = 8e-13
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Frame = +1
Query: 286 PTEIQKQAIGYALQGK-DILGAAKTGSGKTLAFLIPILENLFCK-------KWTRLDGVG 441
PTEIQ + A++ + D+LGAA+TGSGKTLAF IP++ L + T + G
Sbjct: 11 PTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPR 70
Query: 442 ALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGG-QNLKFERKRMDQ-INILICTPGRL 615
AL+++PTREL QI + + + A I+GG +K ER Q +I++ TPGRL
Sbjct: 71 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRL 130
Query: 616 LQHMDE 633
M E
Sbjct: 131 WAMMQE 136
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 70.9 bits (166), Expect = 8e-13
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +1
Query: 160 DAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDI 339
DA +K + + + +TF + L + + Y T IQ+ + QG DI
Sbjct: 534 DAEVK-ITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDI 592
Query: 340 LGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRKI 504
+ A+TGSGKT AFL+PI+ L + G G ++++PTREL QIY RK
Sbjct: 593 MACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Query: 505 GHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
+ + GG + + + ++++ I++ T GR+ +E +
Sbjct: 653 AYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTI 699
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 70.9 bits (166), Expect = 8e-13
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +1
Query: 160 DAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDI 339
DA +K + + + +TF + L + + Y T IQ+ + QG DI
Sbjct: 534 DAEVK-ITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDI 592
Query: 340 LGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRKI 504
+ A+TGSGKT AFL+PI+ L + G G ++++PTREL QIY RK
Sbjct: 593 MACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Query: 505 GHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
+ + GG + + + ++++ I++ T GR+ +E +
Sbjct: 653 AYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTI 699
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 70.9 bits (166), Expect = 8e-13
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +1
Query: 160 DAAIKYLQGQYEKINPDDIRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDI 339
DA +K + + + +TF + L + + Y T IQ+ + QG DI
Sbjct: 534 DAEVK-ITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDI 592
Query: 340 LGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVG-----ALVISPTRELAYQIYETLRKI 504
+ A+TGSGKT AFL+PI+ L + G G ++++PTREL QIY RK
Sbjct: 593 MACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Query: 505 GHFHDFSAGLIIGGQNLKFERKRMDQ-INILICTPGRLLQHMDENPL 642
+ + GG + + + ++++ I++ T GR+ +E +
Sbjct: 653 AYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTI 699
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 70.1 bits (164), Expect = 1e-12
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Frame = +1
Query: 205 PDDIRTFKD-FPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAF 381
P + +F+ F + + ++ N + P+ IQ Q L G+D +G ++TGSGKTLAF
Sbjct: 79 PPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAF 138
Query: 382 LIPILENLFCK--KWTRLD-----GVGALVISPTRELAYQIYETLRKIGHFHDFSAGLII 540
L+P L ++ + ++ + D LV+SPTRELA QI ++K + S L
Sbjct: 139 LLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYG 198
Query: 541 GGQNLKFERKRMDQINILICTPGRL 615
GG + + I+I TPGRL
Sbjct: 199 GGSRPEQVEACRGGVEIVIATPGRL 223
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 66.5 bits (155), Expect = 2e-11
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = +1
Query: 223 FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILEN 402
F+DF L + L + + P+E+Q + I A+ G D++ AK+G GKT F+I L+
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 403 LFCKKWTRLDG-VGALVISPTRELAYQIYETLRKIG-HFHDFSAGLIIGGQNLKFERKRM 576
L +DG V + + TRELA+QI + + + + GG +K + +R+
Sbjct: 103 L-----EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
Query: 577 --DQINILICTPGRLL 618
D +I++ TPGR+L
Sbjct: 158 ANDCPHIVVGTPGRML 173
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 66.5 bits (155), Expect = 2e-11
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = +1
Query: 223 FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILEN 402
F+DF L + L + + P+E+Q + I A+ G D++ AK+G GKT F+I L+
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 403 LFCKKWTRLDG-VGALVISPTRELAYQIYETLRKIG-HFHDFSAGLIIGGQNLKFERKRM 576
L +DG V + + TRELA+QI + + + + GG +K + +R+
Sbjct: 103 L-----EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
Query: 577 --DQINILICTPGRLL 618
D +I++ TPGR+L
Sbjct: 158 ANDCPHIVVGTPGRML 173
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 66.5 bits (155), Expect = 2e-11
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = +1
Query: 223 FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILEN 402
F+DF L + L + + P+E+Q + I A+ G D++ AK+G GKT F+I L+
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 403 LFCKKWTRLDG-VGALVISPTRELAYQIYETLRKIG-HFHDFSAGLIIGGQNLKFERKRM 576
L +DG V + + TRELA+QI + + + + GG +K + +R+
Sbjct: 102 L-----EPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 156
Query: 577 --DQINILICTPGRLL 618
D +I++ TPGR+L
Sbjct: 157 ANDCPHIVVGTPGRML 172
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = +1
Query: 214 IRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQG--KDILGAAKTGSGKTLAFLI 387
I +F++ L + L L N+ PT IQ+ A+ L +++ A++G+GKT AF++
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 388 PILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHD-FSAGLIIGGQNLKFE 564
+L C+ L + ++PT ELA QI E + K+G F D I G N+
Sbjct: 268 TML----CRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAM 323
Query: 565 RKRMDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
R R I+I TPG ++ + D S ++ +VL
Sbjct: 324 RGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVL 360
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = +1
Query: 214 IRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQG--KDILGAAKTGSGKTLAFLI 387
I +F++ L + L L N+ PT IQ+ A+ L +++ A++G+GKT AF++
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 388 PILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHD-FSAGLIIGGQNLKFE 564
+L C+ L + ++PT ELA QI E + K+G F D I G N+
Sbjct: 293 TML----CRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAM 348
Query: 565 RKRMDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
R R I+I TPG ++ + D S ++ +VL
Sbjct: 349 RGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVL 385
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = +1
Query: 214 IRTFKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQG--KDILGAAKTGSGKTLAFLI 387
I +F++ L + L L N+ PT IQ+ A+ L +++ A++G+GKT AF++
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 388 PILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHD-FSAGLIIGGQNLKFE 564
+L C+ L + ++PT ELA QI E + K+G F D I G N+
Sbjct: 677 TML----CRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAM 732
Query: 565 RKRMDQINILICTPGRLLQHMDENPLFDCSHLQIVVL 675
R R I+I TPG ++ + D S ++ +VL
Sbjct: 733 RGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVL 769
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 64.1 bits (149), Expect = 9e-11
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Frame = +1
Query: 235 PLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLF-- 408
P +TL +K NN T IQ I L G D+LG A+T +GKT AF +PI++ +
Sbjct: 390 PTILETLKRIKYNNVRT---IQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRM 446
Query: 409 ----CKKWTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIG-GQNLKFERKR 573
K + DG AL+++PTRELA QI+E LR D L G + +
Sbjct: 447 DEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEI 506
Query: 574 MDQINILICTPGRLLQHMDENPLFDCSHLQIVV 672
+ +ILI T GR++ ++ + HL+ +V
Sbjct: 507 RNGCDILIGTCGRIMDFTVKSHI-SLLHLRFLV 538
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Frame = +1
Query: 322 LQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAYQIYETLRK 501
L+ +D+ AA TGSGKT+ +++P+L + K L A+++ P + L QI + ++
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQ---AVILVPVQTLVAQIVDEFKR 210
Query: 502 IGHFHDFSAGLIIGGQNLKFERK----RMDQINILICTPGRLLQHMDEN--PLFDCSHLQ 663
+ + + G N FE++ D N+++ TP RL+QH+ P D S L+
Sbjct: 211 WNDESGVAKVVSLSGAN-DFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSKLR 269
Query: 664 IVVL 675
+++
Sbjct: 270 FLIV 273
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/146 (26%), Positives = 75/146 (51%)
Frame = +1
Query: 238 LSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKK 417
L ++ L G+ + P+ IQK A+ GKD+ ++ GSGKT+ LI IL+ + C+
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 418 WTRLDGVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQINILI 597
+ ++++P R +A + +E L+ +G + +A + G + E ++ ++L+
Sbjct: 63 ----AHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCL--GFDTTAENDKIS--HVLM 114
Query: 598 CTPGRLLQHMDENPLFDCSHLQIVVL 675
TP L ++ D S +++ VL
Sbjct: 115 GTPKDFLSNIPS----DTSRIKMFVL 136
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 223 FKDFPLSQKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILE 399
F++F + + + L + N+ PT +Q +AI L G D L AA+TGSGKT AF +PI +
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 244 QKTLNGLKANNYVTPTEIQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILE 399
Q+ +N LK + T +Q+ +I +G+ ++ A TG GKT AFLIP +E
Sbjct: 102 QRIVNNLKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 433 GVGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRM-DQINILICTPG 609
G A++I+PT+EL QIY+ K+ F + + N + + D+ ++++ TPG
Sbjct: 96 GPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPG 155
Query: 610 RLLQHMDENPLFDCSHLQIVVL 675
+LL+ P + C+ + +V+
Sbjct: 156 KLLRMCSLRPEY-CTLVSYLVM 176
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 35.1 bits (77), Expect = 0.046
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Frame = +1
Query: 295 IQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVGA------LVIS 456
+Q+++I + +L A TG GKT AFLIP +E + ++ L + L+++
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIE-IALRERPLLTNISTTPSPTILILA 176
Query: 457 PTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERK------RMDQINILICTPGRLL 618
T L Q++ + D II +++K E+ DQ +I CT G+L
Sbjct: 177 NTNSLVEQLFNRCEVLLGLIDMED--IIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLK 234
Query: 619 QHMDENPLFDCSHLQIVVL 675
+++ + +L++++L
Sbjct: 235 ASIEDKTIL-LDNLKMMIL 252
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 295 IQKQAIGYALQGKDILGAAKTGSGKTLAFLIPILE 399
+Q+ +I +G+ ++ A TG GKT AFLIP +E
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 53
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = +1
Query: 271 NNYVTPTEIQKQAIGYALQGKD-ILGAAKTGSGKTLAFLIPILE----NLFCKKWTRLDG 435
+ Y + IQ + AL+ K+ +L A TG+GKT L+ +L+ +L +L+
Sbjct: 272 DGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEE 331
Query: 436 VGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQINILICTP 606
+ I+PT+ L ++ + K F G+ +G + +++ +++CTP
Sbjct: 332 FKIVYIAPTKSLVQEMVGSFSK--RLAPF--GITVGEMTGQMNKEQFMATQVIVCTP 384
>AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical
protein Y39C12A.7 protein.
Length = 324
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = -2
Query: 613 TYLEYILIY*FDPFFFVQILNSVHQ*SVQQRNH--ENVQFS*EFHIFGKLALLL--VISL 446
+Y+ I+ Y + +++ L +H S+ +R EN+QF+ FHIF + V SL
Sbjct: 156 SYIVNIINYKLNRYYYNCSLRKLHTYSLTERYQISENIQFAKFFHIFALTVAVFATVCSL 215
Query: 445 MLQL-HLIWSISYKTSFLI 392
+L L L ++ S K FL+
Sbjct: 216 LLMLTSLSFTASEKNIFLL 234
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 32.7 bits (71), Expect = 0.25
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +1
Query: 298 QKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAY 477
Q++ ALQGK+ + A TGSGKT+ I++ F + + AL ++P +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTV-IAANIIKEHFESRSSEGKRFKALFMTPNSMILN 355
Query: 478 QIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQINILICTPGRLLQHMDE--NPLFDC 651
Q ++ H + +I G N+ R + ++++ TP ++ +E N L D
Sbjct: 356 QQAASISSYLD-HVYHTQIIQGSDNVP-TRNVIQSKDLIVATPQMIVNLCNEHRNSLDDE 413
Query: 652 SHL 660
S L
Sbjct: 414 SRL 416
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 32.7 bits (71), Expect = 0.25
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +1
Query: 298 QKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAY 477
Q++ ALQGK+ + A TGSGKT+ I++ F + + AL ++P +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTV-IAANIIKEHFESRSSEGKRFKALFMTPNSMILN 355
Query: 478 QIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQINILICTPGRLLQHMDE--NPLFDC 651
Q ++ H + +I G N+ R + ++++ TP ++ +E N L D
Sbjct: 356 QQAASISSYLD-HVYHTQIIQGSDNVP-TRNVIQSKDLIVATPQMIVNLCNEHRNSLDDE 413
Query: 652 SHL 660
S L
Sbjct: 414 SRL 416
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.3 bits (70), Expect = 0.33
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +1
Query: 271 NNYVTPTEIQKQAIGYALQGKD-ILGAAKTGSGKTLAFLIPILE----NLFCKKWTRLDG 435
+ Y + IQ + AL+ K+ +L A TG+GKT L+ +L+ +L +LD
Sbjct: 470 DGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDE 529
Query: 436 VGALVISPTRELAYQIYETLRKIGHFHDFSAGLIIGGQNLKFERKRMDQINILICTP 606
+ I+P + L ++ + K + G + G + E+ Q +++CTP
Sbjct: 530 FKIVYIAPMKSLVQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQ--VIVCTP 584
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.57
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 135 WFIQQNFLTPSLSFWVFFFL 76
W + +NFL+ +LSFW+ F+L
Sbjct: 80 WILSKNFLSIALSFWITFYL 99
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 298 QKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAY 477
QKQ I L G D TG+GK+L + +P + L GV +V+SP R L
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV---------ILPGV-TVVVSPLRSLIE 301
Query: 478 QIYETLRKIG 507
++++G
Sbjct: 302 DQKMKMKELG 311
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 298 QKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENLFCKKWTRLDGVGALVISPTRELAY 477
QKQ I L G D TG+GK+L + +P + L GV +V+SP R L
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV---------ILPGV-TVVVSPLRSLIE 301
Query: 478 QIYETLRKIG 507
++++G
Sbjct: 302 DQKMKMKELG 311
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 162 IFLKAFFLTWF--IQQNFLTPS-LSFWVFFFL--FHCKITFL 52
+F FL WF + + F S +F VFFF+ FHC TF+
Sbjct: 192 LFSPCSFLFWFRPVYKAFRNDSSFNFMVFFFVLFFHCIFTFV 233
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 162 IFLKAFFLTWF--IQQNFLTPS-LSFWVFFFL--FHCKITFL 52
+F FL WF + + F S +F VFFF+ FHC TF+
Sbjct: 192 LFSPCSFLFWFRPVYKAFRNDSSFNFMVFFFVLFFHCIFTFV 233
>Z93388-12|CAB07661.2| 294|Caenorhabditis elegans Hypothetical
protein T10C6.4 protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 162 IFLKAFFLTWFIQQNFLTPSLSFWVFFFLFHCKITF 55
IF K + LT+ I N+ P + + FFF ++C F
Sbjct: 107 IFSKNYVLTYIII-NWTLPPVIYSYFFFFYNCSFPF 141
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 298 QKQAIGYALQGKDILGAAKTGSGKTLAFLIPILENL 405
Q++ + AL+GK+ + A TGSGKT + L+++
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHI 410
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 466 ELAYQI-YETLRKIGHFHDFSAGLI 537
E+A Q+ +ETLRK+ F D AGL+
Sbjct: 478 EIAMQVHFETLRKVRIFQDCEAGLL 502
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 352 KTGSGKTLAFLIPILENLFCKKWTRLDGVG-ALVISPTRELAYQIYETLRKIGHFHDFSA 528
+TGSGKT IP F K+ + G A +++ T+ ++ D
Sbjct: 100 ETGSGKTTQ--IPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVL 157
Query: 529 GLIIGGQNLKFERKRMDQINILICTPGRLLQHMDENPLFD 648
G +G +++FE ++ + CT G LL+ +PL D
Sbjct: 158 GQEVG-YSIRFEDCISERTVLKYCTDGMLLREAMNSPLLD 196
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 9.3
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 352 KTGSGKTLAFLIPILENLFCKKWTRLDGVG-ALVISPTRELAYQIYETLRKIGHFHDFSA 528
+TGSGKT IP F K+ + G A +++ T+ ++ D
Sbjct: 100 ETGSGKTTQ--IPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVL 157
Query: 529 GLIIGGQNLKFERKRMDQINILICTPGRLLQHMDENPLFD 648
G +G +++FE ++ + CT G LL+ +PL D
Sbjct: 158 GQEVG-YSIRFEDCISERTVLKYCTDGMLLREAMNSPLLD 196
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 466 ELAYQI-YETLRKIGHFHDFSAGLI 537
E+A Q+ +ETLRK+ F D AGL+
Sbjct: 478 EIAMQVHFETLRKVRIFQDCEAGLL 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,360,174
Number of Sequences: 27780
Number of extensions: 356565
Number of successful extensions: 970
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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