Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23e06
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    27   0.22 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    27   0.22 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.89 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   6.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = -3

Query: 327 YEYYVMVKSILKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLH 148
           Y++ V+V  +    G +     SF + +K    +   I QI+  +  LC L++   S + 
Sbjct: 190 YQFVVLVLQLQHRFGKINRTMRSFFSDNK----QDDKIPQISDNLYILCRLHYKLTSVMQ 245

Query: 147 FLNSYFHISCL 115
            +NS F +  L
Sbjct: 246 KINSAFSVQLL 256


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = -3

Query: 327 YEYYVMVKSILKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLH 148
           Y++ V+V  +    G +     SF + +K    +   I QI+  +  LC L++   S + 
Sbjct: 190 YQFVVLVLQLQHRFGKINRTMRSFFSDNK----QDDKIPQISDNLYILCRLHYKLTSVMQ 245

Query: 147 FLNSYFHISCL 115
            +NS F +  L
Sbjct: 246 KINSAFSVQLL 256


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 127 HFLLISIKGYIAITFLTCAC*FYY 56
           HFLL +   Y A   L C   FYY
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYY 118


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 86  IFNLCMLVLLFWFAVLCSLQIVDHRLYT 3
           IF+L +  +L +FA L    + D +LY+
Sbjct: 47  IFHLILFAVLLYFASLEKNPLFDGQLYS 74


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +1

Query: 460 TTSHGSAIQSEDEPDTANEYHSNLSTKRRKTEIENSTDRNV 582
           + S+ + IQS   P+T  ++       R +   E+S   N+
Sbjct: 64  SVSYSTVIQSVPHPETEKDWGDGDKHDRHERHFESSFGNNL 104


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = +1

Query: 517 YHSNLSTKRRKTEIENS---TDRNVRL 588
           Y+S   T RRK E+ NS   ++R V++
Sbjct: 176 YYSRYITIRRKAELANSLGLSERQVKI 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,601
Number of Sequences: 336
Number of extensions: 3898
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)