Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23e06
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   2.0  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   8.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.0  

>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 649  GNLQSVRRATSSFHLYCFYCLISH 578
            GN  + R  T S  +YC  C++ H
Sbjct: 1052 GNCNAPRAITLSALIYCLRCMVGH 1075


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -1

Query: 137 VISTFLA--YKHKRVHSHNIFNLCMLVLLFW 51
           V+ST L   Y H+   +H + +   ++ L+W
Sbjct: 324 VVSTILILNYHHRNADTHEMSDWVRVIFLYW 354


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 436 SNTYGASSTTSHGSAIQSEDEPDTANEYHS 525
           S++ GASSTT  G+  +S+ + D   E HS
Sbjct: 633 SSSGGASSTTHSGAPSRSQSDED---EQHS 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,489
Number of Sequences: 2352
Number of extensions: 14759
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)