Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23e05
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   2.1  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   6.5  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            22   8.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   8.6  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 412 FGNTCCNYQLSHILFCITIQRC 347
           F    C Y  S++L C+++ RC
Sbjct: 155 FMRAFCLYLSSNVLVCVSLDRC 176


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 257 MAIVWPLWCWTEISCKTRTWKCWKV*NT 340
           + + W +    E+  + + +KCWKV +T
Sbjct: 259 LKVGWSICHIREVMEEQKCYKCWKVGHT 286


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 290 RSNTTTAKQSPLQHIAPSITL 228
           R+N T+   + LQ +AP+IT+
Sbjct: 538 RNNITSLTYANLQFLAPAITV 558


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 42  CEXCGVTHKMPGCAKNKP 95
           C  CG+ HKM G   N+P
Sbjct: 141 CNACGLYHKMNG--MNRP 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,996
Number of Sequences: 2352
Number of extensions: 10108
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)