Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23e05
(448 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 1.2
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 2.0
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 2.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 2.0
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 2.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 2.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 2.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 3.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 4.6
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 21 4.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 4.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.1
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 265 NRHCNTSHLQLHCNFSNXY 209
N++CN L + NF+N Y
Sbjct: 92 NKNCNAGSLTVKKNFANKY 110
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 247 SHLQLHCNFSNXYYKCISRPA 185
SH +L C+ + +Y C+ A
Sbjct: 83 SHTRLSCDCDDKFYDCLKNSA 103
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 247 SHLQLHCNFSNXYYKCISRPA 185
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 291 SVQHHNGQTIAIATHRTFNYTVIFQIXIINVFHVPLXERVRNKQYI 154
+++ HN +T+A + T +I + HVP+ +R N++YI
Sbjct: 335 TLERHNIRTVA-QSDETLQMIASMKIKEA-LPHVPIFDRYINREYI 378
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 247 SHLQLHCNFSNXYYKCISRPA 185
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 291 SVQHHNGQTIAIATHRTFNYTVIFQIXIINVFHVPLXERVRNKQYI 154
+++ HN +T+A + T +I + HVP+ +R N++YI
Sbjct: 335 TLERHNIRTVA-QSDETLQMIASMKIKEA-LPHVPIFDRYINREYI 378
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 291 SVQHHNGQTIAIATHRTFNYTVIFQIXIINVFHVPLXERVRNKQYI 154
+++ HN +T+A + T +I + HVP+ +R N++YI
Sbjct: 335 TLERHNIRTVA-QSDETLQMIASMKIKEA-LPHVPIFDRYINREYI 378
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 388 DNYNKYYQKNCV*INTKFYY 447
+NYN Y N N K YY
Sbjct: 328 NNYNNYNNNNYNNYNKKLYY 347
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 247 SHLQLHCNFSNXYY 206
S L CN+SN YY
Sbjct: 305 SSLSNSCNYSNNYY 318
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 4.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 169 PNALXKRDVKYIYNTYLKNYSVIEGAMCCNGDCLAV 276
P A + K +Y+ L NY+ + + N D L V
Sbjct: 13 PGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTV 48
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.4 bits (43), Expect = 4.6
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 107 LYRPRFIFCATRHFVRH 57
+YRP + T+ F+RH
Sbjct: 6 VYRPTIVKKRTKKFIRH 22
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 269 KQSPLQHIAPSITL 228
+QSP QH+ P TL
Sbjct: 1007 QQSPQQHVLPGKTL 1020
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 391 NYNKYYQKNCV*INTKFYY 447
NYN Y N N K YY
Sbjct: 99 NYNNKYNYNNNNYNKKLYY 117
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 190 DVKYIYNTYLKNYSVIEGAMCCNGDCLAV 276
D K +Y+ L NY+ + + N D + V
Sbjct: 20 DAKRLYDDLLSNYNRLIRPVSNNNDTVVV 48
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 388 DNYNKYYQKNCV*INTKFYY 447
+NYN Y NC K YY
Sbjct: 341 NNYNNNYNNNC----KKLYY 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,064
Number of Sequences: 438
Number of extensions: 3144
Number of successful extensions: 30
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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