Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23d24
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p pro...    33   0.53 
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    33   0.53 
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    33   0.70 

>AY069208-1|AAL39353.1|  374|Drosophila melanogaster GH26152p
           protein.
          Length = 374

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 404 PQCTARQSALSLLQDAQATVKFNSAPVEGHFYAATTLLYAERNLFKIGQTTNLTRRLVS 580
           P  T   +  S+L  AQ    F+  P  GHF AA TLL  E+   K+ + +   +R +S
Sbjct: 287 PAATTLSTVNSILSTAQKLHMFDDKPKGGHFNAAPTLL--EQQQEKMSERSRCLQRTIS 343


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 404  PQCTARQSALSLLQDAQATVKFNSAPVEGHFYAATTLLYAERNLFKIGQTTNLTRRLVS 580
            P  T   +  S+L  AQ    F+  P  GHF AA TLL  E+   K+ + +   +R +S
Sbjct: 3059 PAATTLSTVNSILSTAQKLHMFDDKPKGGHFNAAPTLL--EQQQEKMSERSRCLQRTIS 3115


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = +3

Query: 336 SCSCAPR*PTRRSCKIGFTNTCCPSAPPDSRR*AC---SKTPKRQ-*SLIPLPSRAISMR 503
           SC+  P+  +  SC +G T+  C  APP +++  C   S+ P+ Q  + +P  +R  S +
Sbjct: 381 SCNETPQTTSLPSCPLGSTDPRCRVAPPATKKPRCFSGSRDPECQPATYLPPTTRRSSTK 440

Query: 504 PRRCCTP 524
           PR  C P
Sbjct: 441 PR--CYP 445


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,547,158
Number of Sequences: 53049
Number of extensions: 729940
Number of successful extensions: 2206
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2206
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)