Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23d22
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   3.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 217 NLCVEINTFSIVMCVVVACD 158
           NLC+ I T   V  V+V CD
Sbjct: 280 NLCLVIYTLVSVSLVMVTCD 299


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 217 NLCVEINTFSIVMCVVVACD 158
           NLC+ I T   V  V+V CD
Sbjct: 280 NLCLVIYTLVSVSLVMVTCD 299


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 284 LRTENIRDLAPSISKIMACRLIKS 213
           L TE I+DL      I  C+L+++
Sbjct: 32  LDTEEIKDLLQKYPPIANCKLVQA 55


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 202 FPHTDFINRHAMI 240
           FPH DF+ R   I
Sbjct: 133 FPHHDFLEREGFI 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,394
Number of Sequences: 336
Number of extensions: 2557
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)