Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23d19
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   199   3e-53
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     24   1.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   1.9  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   3.4  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  199 bits (486), Expect = 3e-53
 Identities = 97/123 (78%), Positives = 105/123 (85%)
 Frame = +1

Query: 1   VRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRH 180
           VRTKT+        EKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRH
Sbjct: 4   VRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRH 63

Query: 181 SQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPA 360
           SQVRGISIKLQEEERERRDNYVP+VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P 
Sbjct: 64  SQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPT 122

Query: 361 TQG 369
             G
Sbjct: 123 APG 125


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 193 GISIKLQEEERERRDNYVPEVSALE-HDIIEVDPDTKDMLKMLDFNN 330
           G + +L+EEE + +  + PE+   E  + ++V  + K+M+ + D +N
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISN 132


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 170 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 277
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 271 DIIEVDPDTKDMLKMLDFNNINGL 342
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,193
Number of Sequences: 2352
Number of extensions: 6861
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)