Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23d19
         (417 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   206   9e-54
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   206   9e-54
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   206   9e-54
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   206   9e-54
AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA...    27   10.0 

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  206 bits (503), Expect = 9e-54
 Identities = 100/121 (82%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   VRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRH 180
           VRTKTV        EKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRH
Sbjct: 4   VRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRH 63

Query: 181 SQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPA 360
           SQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP 
Sbjct: 64  SQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPN 123

Query: 361 T 363
           T
Sbjct: 124 T 124


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  206 bits (503), Expect = 9e-54
 Identities = 100/121 (82%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   VRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRH 180
           VRTKTV        EKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRH
Sbjct: 4   VRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRH 63

Query: 181 SQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPA 360
           SQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP 
Sbjct: 64  SQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPN 123

Query: 361 T 363
           T
Sbjct: 124 T 124


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  206 bits (503), Expect = 9e-54
 Identities = 100/121 (82%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   VRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRH 180
           VRTKTV        EKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRH
Sbjct: 4   VRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRH 63

Query: 181 SQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPA 360
           SQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP 
Sbjct: 64  SQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPN 123

Query: 361 T 363
           T
Sbjct: 124 T 124


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  206 bits (503), Expect = 9e-54
 Identities = 100/121 (82%), Positives = 105/121 (86%)
 Frame = +1

Query: 1   VRTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRH 180
           VRTKTV        EKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRH
Sbjct: 4   VRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRH 63

Query: 181 SQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPA 360
           SQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP 
Sbjct: 64  SQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPN 123

Query: 361 T 363
           T
Sbjct: 124 T 124


>AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA
            protein.
          Length = 2013

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +1

Query: 97   EEIAIIPTK--PLRNKIAGFATHLMRRLRHSQVRGISI-KLQEEERERRDNYVPEVSALE 267
            +E+A + T    L+++++     L   LR  Q++  +I +LQ +  E  +  +    ++E
Sbjct: 1122 QEVATLKTSITELQSQVSDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCL----SME 1177

Query: 268  HDIIEVDPDTKDMLKMLD 321
              + E+D DTK   ++LD
Sbjct: 1178 VRLAELDEDTKQKQELLD 1195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,443,183
Number of Sequences: 53049
Number of extensions: 313793
Number of successful extensions: 972
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)