Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23d15
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35402-1|CAA84586.1| 827|Homo sapiens E-cadherin protein. 31 3.3
Z18923-1|CAA79356.1| 882|Homo sapiens E-cadherin protein. 31 3.3
Z13009-1|CAA78353.1| 882|Homo sapiens E-cadherin protein. 31 3.3
L08599-1|AAA61259.1| 878|Homo sapiens uvomorulin protein. 31 3.3
DQ090940-1|AAY68225.1| 882|Homo sapiens cadherin 1, type 1, E-c... 31 3.3
AB025106-1|BAA88957.1| 901|Homo sapiens E-cadherin protein. 31 3.3
AB025105-1|BAA88956.1| 821|Homo sapiens E-cadherin protein. 31 3.3
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 31 5.8
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 31 5.8
X90761-1|CAA62284.1| 448|Homo sapiens HHa2 hair keratin type I ... 30 7.7
X81419-1|CAA57179.1| 405|Homo sapiens hair type I acidic kerati... 30 7.7
BC016029-1|AAH16029.1| 639|Homo sapiens CTTNBP2 N-terminal like... 30 7.7
AL354760-2|CAI22308.1| 639|Homo sapiens novel protein protein. 30 7.7
AB037854-1|BAA92671.1| 652|Homo sapiens KIAA1433 protein protein. 30 7.7
>Z35402-1|CAA84586.1| 827|Homo sapiens E-cadherin protein.
Length = 827
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 750 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 806
>Z18923-1|CAA79356.1| 882|Homo sapiens E-cadherin protein.
Length = 882
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 805 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 861
>Z13009-1|CAA78353.1| 882|Homo sapiens E-cadherin protein.
Length = 882
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 805 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 861
>L08599-1|AAA61259.1| 878|Homo sapiens uvomorulin protein.
Length = 878
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 801 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 857
>DQ090940-1|AAY68225.1| 882|Homo sapiens cadherin 1, type 1,
E-cadherin (epithelial) protein.
Length = 882
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 805 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 861
>AB025106-1|BAA88957.1| 901|Homo sapiens E-cadherin protein.
Length = 901
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 824 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 880
>AB025105-1|BAA88956.1| 821|Homo sapiens E-cadherin protein.
Length = 821
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 DDVVNRADANISTAFSDPL--PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDY 330
D++ N D N+ A +DP P S + YE S S+ + +++E DQD DY
Sbjct: 744 DEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDY 800
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +1
Query: 37 FKESIKKIMDDTEAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFSD 216
F + DD + ++E + + + + RR +T A + +D N T ++
Sbjct: 140 FAANASPFCDDYQDEDEETDQKCSLSSSEEERFISIRRPKTPASS--DFSDLNTQTNWTK 197
Query: 217 PLPGSSAPRYMYESSES-DTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVR 372
LP + M + +++ + P TA D D ++ YT D Y++L R
Sbjct: 198 SLPLPTPEEKMRQQAQTVQADVVPINITASGTGQDDADGHSVYTPDHYSTLGR 250
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +1
Query: 37 FKESIKKIMDDTEAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFSD 216
F + DD + ++E + + + + RR +T A + +D N T ++
Sbjct: 140 FAANASPFCDDYQDEDEETDQKCSLSSSEEERFISIRRPKTPASS--DFSDLNTQTNWTK 197
Query: 217 PLPGSSAPRYMYESSES-DTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVR 372
LP + M + +++ + P TA D D ++ YT D Y++L R
Sbjct: 198 SLPLPTPEEKMRQQAQTVQADVVPINITASGTGQDDADGHSVYTPDHYSTLGR 250
>X90761-1|CAA62284.1| 448|Homo sapiens HHa2 hair keratin type I
intermediate filament protein.
Length = 448
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 508 LNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEA---LRNNIELVQPESDA 654
LNQ+ + L N S ++R +TLE+ L+A LR+++E ES+A
Sbjct: 294 LNQQVATSSEQLQNYQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLTESEA 345
>X81419-1|CAA57179.1| 405|Homo sapiens hair type I acidic keratin
protein.
Length = 405
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 508 LNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEA---LRNNIELVQPESDA 654
LNQ+ + L N S ++R +TLE+ L+A LR+++E ES+A
Sbjct: 251 LNQQVATSSEQLQNYQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLTESEA 302
>BC016029-1|AAH16029.1| 639|Homo sapiens CTTNBP2 N-terminal like
protein.
Length = 639
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Frame = +1
Query: 43 ESIKKIMDDTEAFEKEQEA-ERLRAEQTAANA-------LLNRRAQTSADDVVNRADANI 198
ES+KKI+ D EA + E+L+ T + L++ QT + +NI
Sbjct: 268 ESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNI 327
Query: 199 STAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYT 312
+ + LPG + P Y Y ++++ + +P T T
Sbjct: 328 AKMTNTGLPGPATPAYSY--AKTNGHCDPEIQTTRELT 363
>AL354760-2|CAI22308.1| 639|Homo sapiens novel protein protein.
Length = 639
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Frame = +1
Query: 43 ESIKKIMDDTEAFEKEQEA-ERLRAEQTAANA-------LLNRRAQTSADDVVNRADANI 198
ES+KKI+ D EA + E+L+ T + L++ QT + +NI
Sbjct: 268 ESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNI 327
Query: 199 STAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYT 312
+ + LPG + P Y Y ++++ + +P T T
Sbjct: 328 AKMTNTGLPGPATPAYSY--AKTNGHCDPEIQTTRELT 363
>AB037854-1|BAA92671.1| 652|Homo sapiens KIAA1433 protein protein.
Length = 652
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Frame = +1
Query: 43 ESIKKIMDDTEAFEKEQEA-ERLRAEQTAANA-------LLNRRAQTSADDVVNRADANI 198
ES+KKI+ D EA + E+L+ T + L++ QT + +NI
Sbjct: 281 ESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNI 340
Query: 199 STAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYT 312
+ + LPG + P Y Y ++++ + +P T T
Sbjct: 341 AKMTNTGLPGPATPAYSY--AKTNGHCDPEIQTTRELT 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.128 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,942,899
Number of Sequences: 237096
Number of extensions: 1751500
Number of successful extensions: 5562
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5562
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -