Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23d04
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 327 2e-88
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 307 2e-82
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 262 4e-69
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 227 2e-58
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 201 1e-50
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 187 3e-46
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 184 2e-45
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 178 1e-43
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 177 3e-43
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 175 6e-43
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 152 7e-36
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 124 2e-27
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 124 2e-27
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 122 6e-27
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 110 3e-23
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 110 4e-23
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 102 9e-21
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 86 7e-16
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 77 4e-13
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 76 9e-13
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 75 1e-12
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 75 2e-12
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 73 7e-12
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 73 9e-12
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 66 6e-10
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 66 1e-09
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 62 1e-08
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 61 3e-08
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 60 4e-08
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 60 4e-08
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 59 9e-08
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 58 2e-07
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 57 5e-07
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 55 1e-06
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 52 1e-05
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 52 2e-05
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 50 4e-05
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 49 9e-05
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 48 2e-04
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 47 5e-04
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 34 2.8
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.7
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 33 4.9
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 6.5
UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5; Cyano... 33 6.5
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 8.6
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.6
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 8.6
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 8.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 327 bits (803), Expect = 2e-88
Identities = 160/228 (70%), Positives = 186/228 (81%), Gaps = 6/228 (2%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL
Sbjct: 42 RQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLT 101
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 365
NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH
Sbjct: 102 NFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQH 161
Query: 366 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 545
+Q++ IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVL
Sbjct: 162 SQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVL 221
Query: 546 KRPRFEISKLMELHXXXXXXXXXXXDKS------ERPEGYEPPVQESV 671
K+PRF++S LMELH + +RPEGYEPPVQ SV
Sbjct: 222 KKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVDRPEGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 307 bits (754), Expect = 2e-82
Identities = 153/226 (67%), Positives = 177/226 (78%), Gaps = 4/226 (1%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 365
NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH
Sbjct: 99 NFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQH 158
Query: 366 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 545
QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+L
Sbjct: 159 QQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKML 218
Query: 546 KRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 671
K+P+FE+ KLMELH D K ER +GYEPPVQESV
Sbjct: 219 KKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape)
Length = 656
Score = 262 bits (643), Expect = 4e-69
Identities = 135/222 (60%), Positives = 165/222 (74%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL
Sbjct: 436 RNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLT 493
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 365
NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ
Sbjct: 494 NFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQS 553
Query: 366 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 545
+Q+R IR+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+L
Sbjct: 554 SQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKIL 613
Query: 546 KRPRFEISKLMELHXXXXXXXXXXXDKSERPEGYEPPVQESV 671
K P+F++ KLME+H K ERP + PV E V
Sbjct: 614 KAPKFDLGKLMEVH---GDYSEDVGTKLERPA--DEPVAEGV 650
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 227 bits (555), Expect = 2e-58
Identities = 109/194 (56%), Positives = 146/194 (75%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L
Sbjct: 41 RDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 365
NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA
Sbjct: 99 NFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAAS 158
Query: 366 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 545
+Q+RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+L
Sbjct: 159 SQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLL 218
Query: 546 KRPRFEISKLMELH 587
K+P+F++ L+ LH
Sbjct: 219 KQPKFDLGGLLALH 232
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 201 bits (490), Expect = 1e-50
Identities = 108/207 (52%), Positives = 146/207 (70%), Gaps = 14/207 (6%)
Frame = +3
Query: 9 QVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCN 188
+VG T VNRTQGTK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL N
Sbjct: 41 KVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTN 98
Query: 189 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 368
F+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ +
Sbjct: 99 FYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTS 158
Query: 369 QVRAIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIAKDIEKACHGIY 506
+V+AIRKKM +I+T V++++L+ VV+ LI ++A+ I I+
Sbjct: 159 RVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIF 218
Query: 507 PLRDVCIRKVKVLKRPRFEISKLMELH 587
P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 219 PIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 187 bits (455), Expect = 3e-46
Identities = 91/197 (46%), Positives = 132/197 (67%), Gaps = 3/197 (1%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
+ G TLV ++ G +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN
Sbjct: 43 KSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKT 101
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCY 356
+F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCY
Sbjct: 102 SFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCY 161
Query: 357 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 536
A+ +QVRAIR+K+ IT + + E LI + K IEK I+PL+++ IRKV
Sbjct: 162 AKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKV 221
Query: 537 KVLKRPRFEISKLMELH 587
KVLKRP+ + +K+ EL+
Sbjct: 222 KVLKRPKLDATKIAELY 238
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 184 bits (447), Expect = 2e-45
Identities = 107/223 (47%), Positives = 142/223 (63%), Gaps = 1/223 (0%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G T V R Q TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L
Sbjct: 27 RNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLT 83
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQ 362
N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ
Sbjct: 84 NSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQ 142
Query: 363 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 542
+ QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+
Sbjct: 143 YQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKI 200
Query: 543 LKRPRFEISKLMELHXXXXXXXXXXXDKSERPEGYEPPVQESV 671
L++P+ ++ KL ELH KS+R YEPPVQESV
Sbjct: 201 LQKPKLDLGKLPELHALGLHGSHR---KSDR---YEPPVQESV 237
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 178 bits (433), Expect = 1e-43
Identities = 87/180 (48%), Positives = 118/180 (65%)
Frame = +3
Query: 132 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 311
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 312 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 491
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 492 CHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSERPEGYEPPVQESV 671
I+PL +RKVKVLK+P+ ++ +++ELH + RP+ YEPPV ++V
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKLDLGRILELH--SEGKADEFGEGVPRPDHYEPPVVDAV 183
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 177 bits (430), Expect = 3e-43
Identities = 82/191 (42%), Positives = 131/191 (68%)
Frame = +3
Query: 15 GTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFH 194
G T +N++ GT +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+
Sbjct: 42 GYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFY 100
Query: 195 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 374
G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q+
Sbjct: 101 GLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQI 160
Query: 375 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
+ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP
Sbjct: 161 KDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRP 220
Query: 555 RFEISKLMELH 587
+ + KL E +
Sbjct: 221 KVDAQKLREFY 231
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 175 bits (427), Expect = 6e-43
Identities = 77/195 (39%), Positives = 129/195 (66%)
Frame = +3
Query: 3 KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL 182
KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L
Sbjct: 41 KRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLL 100
Query: 183 CNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQ 362
FH M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CYA+
Sbjct: 101 TQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAK 160
Query: 363 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 542
V+ +R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V
Sbjct: 161 QRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRV 220
Query: 543 LKRPRFEISKLMELH 587
++ P+F+ L+ H
Sbjct: 221 VRTPKFDAQALLSAH 235
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 152 bits (369), Expect = 7e-36
Identities = 78/160 (48%), Positives = 109/160 (68%)
Frame = +3
Query: 3 KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL 182
+R VG +VN+T GT+IASE LKGRV EV+LADL + KF+ E V G++ L
Sbjct: 42 RRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCL 99
Query: 183 CNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQ 362
FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+
Sbjct: 100 MIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAK 159
Query: 363 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 482
Q++ IRK M +IT++ + EL + V+ L + K +
Sbjct: 160 SAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 124 bits (300), Expect = 2e-27
Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Frame = +3
Query: 381 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 560
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 561 EISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 671
E+ KLMELH D K ER +GYE PVQESV
Sbjct: 171 ELGKLMELHGEGCSSGKATGDETGVKVERADGYELPVQESV 211
Score = 95.9 bits (228), Expect = 8e-19
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L
Sbjct: 42 RNIGKTLVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLT 95
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 284
NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 96 NFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 124 bits (300), Expect = 2e-27
Identities = 67/194 (34%), Positives = 105/194 (54%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G T V +T G ++A++ + RV+EV+L DL + KF L + V L
Sbjct: 39 RHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLT 98
Query: 186 NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH 365
NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ +
Sbjct: 99 NFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKG 158
Query: 366 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 545
+R +R + E + ++ + +V KL + + +A I RDV IR+VKV+
Sbjct: 159 RVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVV 218
Query: 546 KRPRFEISKLMELH 587
KRPR + L +H
Sbjct: 219 KRPRNTMELLSTMH 232
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 122 bits (295), Expect = 6e-27
Identities = 60/159 (37%), Positives = 98/159 (61%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 548
+++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 110 bits (265), Expect = 3e-23
Identities = 61/184 (33%), Positives = 100/184 (54%)
Frame = +3
Query: 3 KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL 182
KR +G T+ N+ ++ + + RV+E+S AD+ D +R IA G V
Sbjct: 37 KRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVY 93
Query: 183 CNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQ 362
F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S + YA
Sbjct: 94 TQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYAN 153
Query: 363 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 542
+ R +R M + +T + + ++ + + I +I + C I + V I KVKV
Sbjct: 154 SHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVEKCKQICQIESVYITKVKV 213
Query: 543 LKRP 554
+K P
Sbjct: 214 IKAP 217
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 110 bits (264), Expect = 4e-23
Identities = 56/179 (31%), Positives = 100/179 (55%)
Frame = +3
Query: 12 VGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNF 191
+G TL+ + + + ++++VSLAD+ E S F + + F
Sbjct: 40 IGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKF 96
Query: 192 HGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 371
HG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +Q
Sbjct: 97 HGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQ 156
Query: 372 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 548
RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 157 KRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 102 bits (244), Expect = 9e-21
Identities = 51/79 (64%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = +3
Query: 447 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD- 623
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH D
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 624 ---KSERPEGYEPPVQESV 671
K ER EGYEPPVQESV
Sbjct: 61 TGAKVERAEGYEPPVQESV 79
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/70 (64%), Positives = 52/70 (74%)
Frame = +3
Query: 6 RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L
Sbjct: 42 RNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLI 98
Query: 186 NFHGMDLTTD 215
NF M L+ D
Sbjct: 99 NFRSMGLSCD 108
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 77.0 bits (181), Expect = 4e-13
Identities = 52/167 (31%), Positives = 86/167 (51%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 572
E +N+++ +A +I K IYPLR V I K +++ RP +K
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRPAVAAAK 199
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 75.8 bits (178), Expect = 9e-13
Identities = 50/160 (31%), Positives = 82/160 (51%)
Frame = +3
Query: 75 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 254
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 255 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 434
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 435 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
+ + +++ ++A D+ I P+R V I K+KVLK P
Sbjct: 164 GQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 75.4 bits (177), Expect = 1e-12
Identities = 54/169 (31%), Positives = 85/169 (50%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 578
E V +I D +++ K IYP+R + IRK +VL P +I +L+
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 74.9 bits (176), Expect = 2e-12
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Frame = +3
Query: 60 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 239
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 240 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 419
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 420 TNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
+ E + + + +SI + I++A IYP+R IRK +VL+ P
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 72.9 bits (171), Expect = 7e-12
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +3
Query: 42 GTKIASEG--LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 215
GT +A + L GR E ++ +L D ++ K L V G + G +LTTD
Sbjct: 33 GTTMAGDPSLLVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTD 90
Query: 216 KLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 395
+R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q++AIR+ M
Sbjct: 91 YVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMM 141
Query: 396 CEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
+I+ + + ++ + + I ++ I + IYPLR V IRK +V P
Sbjct: 142 VDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 72.5 bits (170), Expect = 9e-12
Identities = 49/161 (30%), Positives = 80/161 (49%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
+ + + + + +I K IYP+R V IRK+++L P
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 66.5 bits (155), Expect = 6e-10
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Frame = +3
Query: 66 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 245
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 246 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 425
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 426 SELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
S L E++ ++ S+A I+++ IYPLR V I K K+L P
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKLLWVP 195
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 65.7 bits (153), Expect = 1e-09
Identities = 47/165 (28%), Positives = 85/165 (51%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR EVS D+ D KF+++ V L M++T D +R +V++ +
Sbjct: 43 GRTVEVSFYDITKDVSQLHIKLKFQIVK--VDDGIALTQLKLMEMTRDYIRSLVRRGTSR 100
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
++A +DV+T DG +RV + T +S+ KT +Q +AIR+ M +II+ + +
Sbjct: 101 VDAILDVQTKDGVKMRVMALAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLD 151
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 566
+ + + ++A +++ IYP++ V + K+KVL P EI
Sbjct: 152 FDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL-TPTTEI 195
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +3
Query: 513 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 671
R +C++KVK+LK+P+FE+ KLMELH D K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 60.9 bits (141), Expect = 3e-08
Identities = 42/161 (26%), Positives = 75/161 (46%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
++++ ++ ++ I IYPLR V I+K + RP
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 60.5 bits (140), Expect = 4e-08
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 428
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 429 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 572
E V ++I ++A +I I PLR I K KVL P + K
Sbjct: 158 TFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFAPLIKEGK 205
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 60.5 bits (140), Expect = 4e-08
Identities = 50/162 (30%), Positives = 72/162 (44%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR E +L DL D +FR+ V L F+GM+LT D +R +V++ +
Sbjct: 50 GRNVETTLYDLTKDLSHINVKLRFRVNG--VDDGRALTQFNGMELTRDYVRNLVRRGSSK 107
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
+ DV T DG LR+ + T T T IRK + + + + S+
Sbjct: 108 VMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKHLIRKSIMDRLDKVGQESD 158
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 557
+V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 59.3 bits (137), Expect = 9e-08
Identities = 45/161 (27%), Positives = 75/161 (46%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 554
V+ ++ +++ I IYPLR V I+K+ + RP
Sbjct: 151 FESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 58.4 bits (135), Expect = 2e-07
Identities = 44/161 (27%), Positives = 77/161 (47%)
Frame = +3
Query: 66 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 245
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 246 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 425
+ I A ++V+T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 426 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 548
+ E V+ ++ + I C ++PL+ V I K +V++
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIE 198
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 56.8 bits (131), Expect = 5e-07
Identities = 42/165 (25%), Positives = 82/165 (49%)
Frame = +3
Query: 54 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 233
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 234 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 413
++++ I+ IDV T DGY++R+ + T K Q + ++IR K +++
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLG 158
Query: 414 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 548
V + + ++ S+ +I+ IYP R V IRK ++L+
Sbjct: 159 YVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRKSQLLQ 203
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 55.2 bits (127), Expect = 1e-06
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +3
Query: 42 GTKIASE--GLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 215
G IASE +KGR+ + +L ++ D + F+ IAE V G F G ++T D
Sbjct: 34 GDTIASEVETVKGRIMQATLGEITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRD 91
Query: 216 KLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKM 395
LR +VK+ + I+ ++ V T D +R+ ++S A Q A+R +
Sbjct: 92 YLRSLVKRRSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQEHALRNAI 142
Query: 396 CEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 542
+ +L +VN ++ I+KD+ K +YP R V I K KV
Sbjct: 143 TAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 52.4 bits (120), Expect = 1e-05
Identities = 41/160 (25%), Positives = 75/160 (46%)
Frame = +3
Query: 66 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 245
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 246 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 425
+ I+A+ VKT D +++ + T T A+ +Q + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAE 152
Query: 426 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 545
E++ ++ +A ++ IYPL+ V I K KVL
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 51.6 bits (118), Expect = 2e-05
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +3
Query: 60 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 239
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 240 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 416
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 417 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 533
++ V+ ++ ++K + C I+P+R + I K
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIFPVRRIEIIK 190
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 50.4 bits (115), Expect = 4e-05
Identities = 39/169 (23%), Positives = 78/169 (46%)
Frame = +3
Query: 69 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 248
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 249 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS 428
+ +DVKT+DGYV R+ + T + + +K A+R + ++I V
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQM 152
Query: 429 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 575
+ + V I DI + +R + + KVK+++ +I+ L
Sbjct: 153 NIDQFVQAACYGKINSDILSRAKKLVKVRHMGLEKVKLVRTAEEQITLL 201
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 49.2 bits (112), Expect = 9e-05
Identities = 42/160 (26%), Positives = 71/160 (44%)
Frame = +3
Query: 72 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
GR EV ++D + + FR+ + G+ F G ++ D +R MV++ +
Sbjct: 45 GRKVEVPVSDFTGNFRKSSTMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKER 102
Query: 252 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 431
I+ + KT DGY L V I + L+ K +R K+ I +
Sbjct: 103 IDIIMPSKTKDGYRL-VIKIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMT 153
Query: 432 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 551
L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 154 LPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 48.4 bits (110), Expect = 2e-04
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Frame = +3
Query: 12 VGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CN 188
+G + N+ + + R EVSL++L D S+ K + Y + +
Sbjct: 41 IGYIINNKYTNNSGRLKEISKRNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTT 97
Query: 189 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 368
F+G L+ D + MV K L+E +I + T V+ +F + +T +L Y + +
Sbjct: 98 FNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRS 156
Query: 369 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 539
++R I ++ I + + N + + D I I++ + P+++ I ++K
Sbjct: 157 RIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKRVIPIKNFIISRIK 213
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 46.8 bits (106), Expect = 5e-04
Identities = 44/177 (24%), Positives = 78/177 (44%)
Frame = +3
Query: 57 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 236
S + RV EV +++L + FR+ +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 237 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 416
+ + I+ DVKT+D ++ V + T+ + +K IRK + + I
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNK 149
Query: 417 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 587
+ E V LI D I D+ A IYPL+ + +RK +++ +S + E+H
Sbjct: 150 GLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV-----SLSGISEIH 201
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 34.3 bits (75), Expect = 2.8
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -2
Query: 644 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 468
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 467 GV 462
G+
Sbjct: 5545 GL 5546
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -3
Query: 268 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 104
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 4.9
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +3
Query: 165 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 344
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 345 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 482
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 33.5 bits (73), Expect = 4.9
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = -3
Query: 574 NFEISKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVMISH 395
N + GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2010 NSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARARKQP 2068
Query: 394 IFFLIALT*VCWA*HVLRWLKES 326
F +A+ + +++WL S
Sbjct: 2069 FFQQMAILDINVKAQLVQWLSHS 2091
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 419 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 312
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5;
Cyanobacteria|Rep: DNA mismatch repair protein - Lyngbya
sp. PCC 8106
Length = 563
Score = 33.1 bits (72), Expect = 6.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -3
Query: 217 LSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSAS--VSACRSARETSKTLPFNPSEAIFV 44
L VR++P ++ + C + I L+L KDL A+ +ACRSA L + +
Sbjct: 463 LWAVRTVP-EMLAQREDCHDALIELSLGKDLQAAQVATACRSAIRNGTPLSLTEMQTLLE 521
Query: 43 PWVR 32
WVR
Sbjct: 522 QWVR 525
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 396 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 563
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 199 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 324
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 342 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 488
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 429 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 581
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,250,719
Number of Sequences: 1657284
Number of extensions: 13984292
Number of successful extensions: 41738
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 40206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41695
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -