Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23d01
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.48 
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    25   1.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.5  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   3.3  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    23   7.7  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 315 ISQVTSNVRTHGPQYYSNSLPVPQQE 392
           IS+ TS + +H P+  SNSLP+PQ E
Sbjct: 415 ISEETSALPSH-PRRRSNSLPIPQIE 439


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 167 RVDIQTTVSEDRVTCI*RDVFENHRLGLSGLDLLINNPPDDRISP--TTSTHI 319
           R +IQT   +  +  + RDV+E   LG      L  N P  ++ P  T ST+I
Sbjct: 3   RAEIQTVEQKHVIPAMFRDVYEKVELGSDSWQGL--NAPTGKLYPWDTQSTYI 53


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 168 ELTSKLQLVKTGSPAFEEMYSKTTGWALVALICSSTILQTIAYPQQ 305
           + + K+ +V TGS   + ++   T   + A I  +T L   A P+Q
Sbjct: 52  DCSKKVAIVATGSLPLQRIWCSNTPGLVAAEIGGTTFLSCYAPPRQ 97


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 276 ILQTIAYPQQLPLISQVTSNVRTHGPQYYSNSLPVPQQEE 395
           IL  +  P   P +  + S+V    PQ+  N     QQEE
Sbjct: 65  ILNLLGLPGPRPAVRHLHSSVGKSAPQFLLNVYDQLQQEE 104


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 92  LSLTDKYLITLNITTFVVMLICCITHT 12
           L + D YL+ + +T  +  + CC+  T
Sbjct: 23  LKIVDAYLLYILLTGIMQFVYCCLVGT 49


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 471 ECHLDHLGR 445
           ECHLDH GR
Sbjct: 328 ECHLDHNGR 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,169
Number of Sequences: 2352
Number of extensions: 16054
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)