Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23d01
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457293-1|CAG33574.1|  332|Homo sapiens MRPL44 protein.               31   4.5  
BC012058-1|AAH12058.1|  332|Homo sapiens mitochondrial ribosomal...    31   4.5  
AK024052-1|BAB14802.1|  332|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AK022763-1|BAB14234.1|  332|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AC073641-2|AAY14925.1|  332|Homo sapiens unknown protein.              31   4.5  

>CR457293-1|CAG33574.1|  332|Homo sapiens MRPL44 protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 517 DRKFVHENPSEIELV*MSSRSSRATFLRAFGFSANLRSWTIS 392
           D+K + E P E  LV     ++R    + +GF+ N R W  S
Sbjct: 277 DKKLIAEGPGETVLV-AEEEAARVALRKLYGFTENRRPWNYS 317


>BC012058-1|AAH12058.1|  332|Homo sapiens mitochondrial ribosomal
           protein L44 protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 517 DRKFVHENPSEIELV*MSSRSSRATFLRAFGFSANLRSWTIS 392
           D+K + E P E  LV     ++R    + +GF+ N R W  S
Sbjct: 277 DKKLIAEGPGETVLV-AEEEAARVALRKLYGFTENRRPWNYS 317


>AK024052-1|BAB14802.1|  332|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13990 fis, clone Y79AA1002089. ).
          Length = 332

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 517 DRKFVHENPSEIELV*MSSRSSRATFLRAFGFSANLRSWTIS 392
           D+K + E P E  LV     ++R    + +GF+ N R W  S
Sbjct: 277 DKKLIAEGPGETVLV-AEEEAARVALRKLYGFTENRRPWNYS 317


>AK022763-1|BAB14234.1|  332|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12701 fis, clone NT2RP1000730. ).
          Length = 332

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 517 DRKFVHENPSEIELV*MSSRSSRATFLRAFGFSANLRSWTIS 392
           D+K + E P E  LV     ++R    + +GF+ N R W  S
Sbjct: 277 DKKLIAEGPGETVLV-AEEEAARVALRKLYGFTENRRPWNYS 317


>AC073641-2|AAY14925.1|  332|Homo sapiens unknown protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 517 DRKFVHENPSEIELV*MSSRSSRATFLRAFGFSANLRSWTIS 392
           D+K + E P E  LV     ++R    + +GF+ N R W  S
Sbjct: 277 DKKLIAEGPGETVLV-AEEEAARVALRKLYGFTENRRPWNYS 317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,270,809
Number of Sequences: 237096
Number of extensions: 2252626
Number of successful extensions: 8536
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8536
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)