Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23c17
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 204 4e-53
10_08_0620 - 19321612-19323237 191 4e-49
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 171 6e-43
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 159 2e-39
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 156 1e-38
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 146 2e-35
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 136 1e-32
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 119 2e-27
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 114 6e-26
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 114 8e-26
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 92 5e-19
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 71 9e-13
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 69 5e-12
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 60 2e-09
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 58 7e-09
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 56 3e-08
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 54 9e-08
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 50 1e-06
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 43 3e-04
01_05_0200 - 19196606-19197304 31 0.93
02_04_0127 + 19992651-19993334,19993853-19993885,19994060-199941... 31 1.2
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 31 1.2
12_02_0335 - 17669232-17670063,17670619-17672150 30 2.2
11_06_0417 - 23312875-23312925,23314136-23314246,23315073-23315537 29 3.8
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 28 8.7
03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874... 28 8.7
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 28 8.7
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 204 bits (499), Expect = 4e-53
Identities = 99/186 (53%), Positives = 137/186 (73%)
Frame = +3
Query: 132 AGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTIT 311
A A + Y D + D+R NI AA+AVADA+RTSLGPRGMDKMI + EV IT
Sbjct: 6 AASPAQSRKTETYTDTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIIT 65
Query: 312 NDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPT 491
NDGATIL +MS++ PAA+ML ELSR+QD AGDGTT+VVV+AG+LL A+ LL G HPT
Sbjct: 66 NDGATILSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPT 125
Query: 492 VISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAI 671
+D + A++V+ M+ P++L++ D+L+K+A+T+LNSKVVSQ+S++L+P+AV A
Sbjct: 126 AAADALHRLATRAVEVLHAMAIPIELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAA 185
Query: 672 RAVMEP 689
+V++P
Sbjct: 186 LSVVDP 191
>10_08_0620 - 19321612-19323237
Length = 541
Score = 191 bits (466), Expect = 4e-49
Identities = 99/193 (51%), Positives = 134/193 (69%), Gaps = 4/193 (2%)
Frame = +3
Query: 123 APKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG-- 296
A A A + Y D + D+R NI A +AVA A RTSLGPRGMDKMI +++
Sbjct: 3 AAVAASPAQSRKTETYTDTKRRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGG 62
Query: 297 --EVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLL 470
V ITNDGATIL +M ++ PAA+ML +LSR+QD AGDGTT+VVV+AG+LL A+ LL
Sbjct: 63 DQAVIITNDGATILSRMPLLQPAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLL 122
Query: 471 QKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILA 650
G HPT +D A++V+ M+ PV+L++ DAL+K+A+T+LNSKVVSQ+ST+L+
Sbjct: 123 SAGAHPTAAADALHLLAARAVEVLHGMAIPVELSDRDALVKSASTALNSKVVSQYSTLLS 182
Query: 651 PIAVQAIRAVMEP 689
P+AV A AV++P
Sbjct: 183 PLAVDAALAVVDP 195
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 171 bits (415), Expect = 6e-43
Identities = 87/174 (50%), Positives = 129/174 (74%), Gaps = 2/174 (1%)
Frame = +3
Query: 171 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVI 350
K + + D + +NI A KAVA +RTSLGP+GMDKM+Q+ +G+VTITNDGATIL+QM V
Sbjct: 21 KSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD 80
Query: 351 HPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLA 530
+ AK++VELS +QD E GDGTT VVV+AG+LL+ AEKLL++GIHP I++G++ A ++A
Sbjct: 81 NQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIA 140
Query: 531 LQVVENMSTPVDLN--NEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 686
+E++S + + N + L++ T+L+SK+V++ LA IAV+A+ AV +
Sbjct: 141 FDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVAD 194
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 159 bits (386), Expect = 2e-39
Identities = 82/178 (46%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 144 AIKANSSVYKDKSKP---TDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITN 314
A+ A V KD K T + +NI AAKAVAD IRT+LGPR M KM+ A+G + +TN
Sbjct: 2 ALNAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTN 61
Query: 315 DGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTV 494
DG IL+++ + HPAAK ++ELSR QD E GDGTTSV+V+AG +L AE + K HPTV
Sbjct: 62 DGNAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTV 121
Query: 495 ISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQA 668
I + KAL+ AL V++ ++ VD+N+ A+L +S+ +K Q ++A +A+ A
Sbjct: 122 ICRAYTKALEDALAVLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDA 179
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 156 bits (379), Expect = 1e-38
Identities = 83/197 (42%), Positives = 122/197 (61%), Gaps = 3/197 (1%)
Frame = +3
Query: 144 AIKANSSVYKDKSKP---TDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITN 314
A+ A V KD K T + +NI AAKAVAD IRT+LGP+ M KM+ A G + +TN
Sbjct: 2 ALHAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTN 61
Query: 315 DGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTV 494
DG IL+++ + HPAAK ++ELSR QD E GDGTTSV+V+AG +L A+ + K HPTV
Sbjct: 62 DGNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTV 121
Query: 495 ISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIR 674
I + KAL AL V++ ++ PVD+++ A+L +S+ +K Q ++A +A+ A
Sbjct: 122 ICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDATT 181
Query: 675 AVMEPIVSGVGARVDLR 725
+ G+ VD++
Sbjct: 182 TAGVDLGQGI-REVDIK 197
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 146 bits (353), Expect = 2e-35
Identities = 69/164 (42%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Frame = +3
Query: 201 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVEL 380
+SNINA VAD +RT+LGPRGMDK+I G TI+NDGATI++ + +IHPAAK+LV++
Sbjct: 26 VSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAKILVDI 85
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTP 560
+++QD E GDGTT+VV++A L A+ ++ G+HP + ++ A LA++ V++++T
Sbjct: 86 AKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATS 145
Query: 561 VD----LNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
++ ++ L K AAT+L+SK++ A + V A+ A+
Sbjct: 146 IEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAI 189
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 136 bits (330), Expect = 1e-32
Identities = 72/163 (44%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Frame = +3
Query: 198 RLSNINAAKAVADAIRTSLGPRGMDKMIQAANG--EVTITNDGATILKQMSVIHPAAKML 371
R++ A A+AD ++T+LGP+GMDK++Q+ VT+TNDGATILK + + +PAAK+L
Sbjct: 18 RMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVL 77
Query: 372 VELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVV--E 545
V++S+ QD E GDGTTSVVV+AG LL AEKL+ IHP I G++ A++ A +
Sbjct: 78 VDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLER 137
Query: 546 NMSTPVDLNN-EDALLKAAATSLNSKVVSQHSTILAPIAVQAI 671
M +++ L+ A T+L+SK++SQ A +AV A+
Sbjct: 138 TMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAV 180
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 119 bits (287), Expect = 2e-27
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Frame = +3
Query: 198 RLSNINAAKAVADAIRTSLGPRGMDKMIQAANG--EVTITNDGATILKQMSVIHPAAKML 371
R+++ A++D ++T+LGP+GMDK++Q+ VT+TNDGATILK + + +PAAK+L
Sbjct: 19 RMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVL 78
Query: 372 VELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHP-TVISDGFQKALQLALQVVEN 548
V++S+ QD E GDGTTSVVV+AG LL AEKL+ IHP T+I+D F+
Sbjct: 79 VDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIADKFRS----------- 127
Query: 549 MSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAI 671
DL N A T+L+SK++SQ A +AV A+
Sbjct: 128 -----DLMN------IAMTTLSSKILSQDKEYFAGLAVDAV 157
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 114 bits (275), Expect = 6e-26
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = +3
Query: 201 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVEL 380
L NI+A + ++ RTSLGP GM+KM+ ++ +TND ATI+ ++ V HPAAK+LV
Sbjct: 25 LKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLA 84
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENM--- 551
RAQ E GDG + AG LL+ AE+L++ G+HP+ I G+ KA+ ++++E++
Sbjct: 85 GRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEK 144
Query: 552 -STPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
S +D+ N++ ++ +++ SK Q IL P+ A V
Sbjct: 145 GSENMDVRNKEEVVLLMRSAVASKQFGQED-ILCPLVADACMQV 187
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 114 bits (274), Expect = 8e-26
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 386
NINAAK + D ++T+LGP+G KM+ G++ +T DG T+LK+M + +P A M+ +
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVD 566
AQD +GDGTTS V+ G L+ +E+ + +G HP + DGF A + L+ +E T V
Sbjct: 82 AQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVV 141
Query: 567 LNNE---DALLKAAATSLNSKV 623
+ +E + L A T+L +KV
Sbjct: 142 MGDEPDREILKMIARTTLRTKV 163
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 91.9 bits (218), Expect = 5e-19
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +3
Query: 294 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 473
G+VTITNDGATIL+ + V HPAAK+LVEL+ QD E GDGTTSVV+IA LL L++
Sbjct: 7 GDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVR 66
Query: 474 KGIHPTVISDGFQ 512
IHPT I G++
Sbjct: 67 NKIHPTSIISGYR 79
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 70.9 bits (166), Expect = 9e-13
Identities = 41/162 (25%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Frame = +3
Query: 213 NAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHP----AAKMLVEL 380
N +AD + +LGP+G + ++++ G I NDG T+ K++ + P AK++ +
Sbjct: 70 NGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 129
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTP 560
+ + AGDGTT+ VV+A ++ K++ G +P I+ G +K + + ++ MS
Sbjct: 130 AAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKMSKE 189
Query: 561 VDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 686
V+ ++E A + A + N ++ + + + + Q + + E
Sbjct: 190 VE-DSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEE 230
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 68.5 bits (160), Expect = 5e-12
Identities = 43/184 (23%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Frame = +3
Query: 147 IKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGAT 326
+KA +Y +K +L +AD + +LGP+G + ++++ G I NDG T
Sbjct: 54 VKAAKELYFNKDGSAIKKLQT--GVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVT 111
Query: 327 ILKQMSVIHPA----AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTV 494
+ +++ + P AK++ + + + AGDGTT+ VV+A L+ K++ G +P
Sbjct: 112 VAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQ 171
Query: 495 ISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIR 674
I+ G +K + ++ ++ +S V+ ++E A + A + N ++ + + ++ + + +
Sbjct: 172 ITRGIEKTAKALVEELKKLSKEVE-DSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVV 230
Query: 675 AVME 686
+ E
Sbjct: 231 TLEE 234
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Frame = +3
Query: 135 GGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITN 314
G + A K+ + R + + +ADA++ ++GP+G + +I+ ++ +T
Sbjct: 108 GEQRLWARGYAAKEVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTK 167
Query: 315 DGATILKQM----SVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGI 482
DG T+ K + S + A ++ +++ A + AGDGTT V+ A+L K + G+
Sbjct: 168 DGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAGDGTTCATVLTQAILTEGCKAVAAGV 227
Query: 483 HPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSK 620
+ + +G KA+ +++ + + N+ + + + A S N +
Sbjct: 228 NVMDLRNGINKAISSITTHLKSKAWII--NSSEEINQVATISANGE 271
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 58.0 bits (134), Expect = 7e-09
Identities = 34/142 (23%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Frame = +3
Query: 171 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMS-- 344
KD + R + + +ADA++ ++GP+G +I+ + G +T DG T+ K +
Sbjct: 73 KDIKFGVEARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFS 132
Query: 345 --VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKA 518
V + A ++ +++ A + AGDGTT V+ A+ K + G++ + G A
Sbjct: 133 NRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMA 192
Query: 519 LQLALQVVENMSTPVDLNNEDA 584
+ + ++ M+ + + E A
Sbjct: 193 VDEVVTNLKGMARMISTSEEIA 214
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 228 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHP----AAKMLVELSRAQD 395
+A A+ +LGPRG + ++ G + NDG TI + + + P A ++ E++ +
Sbjct: 64 LAAAVAVTLGPRGRNVVLDEF-GSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122
Query: 396 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPV 563
AGDGTT+ V+A ++ + G +P I G K + ++ +E S PV
Sbjct: 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPV 178
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 228 VADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHP----AAKMLVELSRAQD 395
+A+A+ +LGPRG + ++ G + NDG TI + + + P A ++ E++ +
Sbjct: 59 LANAVGVTLGPRGRNVVLDEY-GSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTN 117
Query: 396 IEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPV 563
AGDGTT+ V+A ++ + G +P + G K + ++ +E + PV
Sbjct: 118 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKARPV 173
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Frame = +3
Query: 123 APKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPR---------GMDK 275
A + G + + KD + R + + +ADA++ ++GP+ G +
Sbjct: 19 ARQVGSRLALSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKIGLNVSIMQGRNV 78
Query: 276 MIQAANGEVTITNDGATILKQMS----VIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGA 443
+I+ + G +T DG T+ K + V + A ++ +++ A + AGDGTT V+ A
Sbjct: 79 VIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKA 138
Query: 444 LLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDA 584
+ K + G++ + G A+ + ++ M+ + + E A
Sbjct: 139 IFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIA 185
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Frame = +3
Query: 306 ITNDGATILKQM----SVIHPAAKMLVE----LSRAQDIEAGDGTTSVVVIAGALLDSAE 461
+ NDG TI K + +V H A +L E ++ + GDGTT+ +++A +++
Sbjct: 607 VINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTTTAIILAREIINLGL 666
Query: 462 KLLQKGIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVV 626
+ G +P + G KA+ + +++ PV ED A+ ++ N + V
Sbjct: 667 LAVATGANPVALRKGIDKAVHELIGILKTKCIPVS-TKEDIKAVASISAGNDEYV 720
>01_05_0200 - 19196606-19197304
Length = 232
Score = 31.1 bits (67), Expect = 0.93
Identities = 30/93 (32%), Positives = 42/93 (45%)
Frame = +3
Query: 180 SKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPA 359
S P D +L AA A A + S P +D A NG N ++ +VI A
Sbjct: 46 SGPRDDKLLPKPAAAAAALRLSHSNRPGEVDVAAAATNGRHHHVNGSSS---SSAVIVAA 102
Query: 360 AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSA 458
+ L +A +EA G+ VVVIAG + +A
Sbjct: 103 SPSLTP--KAAALEAAAGSRDVVVIAGGAMPAA 133
>02_04_0127 +
19992651-19993334,19993853-19993885,19994060-19994128,
19994494-19994581,19994627-19995132,19995210-19995503,
19995557-19995906,19996020-19996456,19996718-19996743,
19996995-19997078
Length = 856
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 135 GGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEV 302
GGDA A S +YK + D +++ +A AD++RT L R ++ ++ +A+ V
Sbjct: 27 GGDASAALSFIYKGWREVRDSASADLRLMRARADSLRT-LADRELEHLLVSASTTV 81
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +3
Query: 477 GIHPTVISDGFQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTI 644
G+ +VIS G+ +L+ +V+EN+S + + +ED + A +L+ V S+H+ +
Sbjct: 281 GVSRSVISIGWDFSLRTVERVMENISQALAITDEDQAI--ARDALDLPVFSEHAKL 334
>12_02_0335 - 17669232-17670063,17670619-17672150
Length = 787
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 596 SCNITKFQSSFTTLNYFGTHCSASNSSSNGTYC 694
S N TKF SS +++ T CS+++S +N T C
Sbjct: 290 SSNSTKFCSSKESISLASTSCSSTSSITNPTSC 322
>11_06_0417 - 23312875-23312925,23314136-23314246,23315073-23315537
Length = 208
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -2
Query: 236 ISNSFCGIYVAQSDVCRFTFIFIY*RISFNSITAS 132
++ + C ++V + VC F + + R+S +S++ S
Sbjct: 27 VAQAVCAVHVVNAHVCSFALVLYFARVSSSSLSLS 61
>06_03_0908 - 25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/65 (36%), Positives = 31/65 (47%)
Frame = +3
Query: 312 NDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPT 491
N GAT L + + +K L LS IE +VVV+ G DS + L G+H T
Sbjct: 861 NHGATRLSVIPIHASRSKALRYLSVRWGIEL----QNVVVLVGETGDSDYEELFGGLHKT 916
Query: 492 VISDG 506
VI G
Sbjct: 917 VILKG 921
>03_02_0473 +
8745721-8745994,8746083-8746090,8746232-8746324,
8746665-8746893,8747314-8747420,8747560-8747622,
8747883-8747983,8748996-8749090,8749330-8749350,
8749987-8750082,8750188-8750308,8750415-8750570,
8750679-8750869,8751207-8751478,8751853-8751954,
8752006-8752038,8752132-8752308,8752397-8752466,
8752512-8752585,8752667-8752908,8752983-8753129,
8753526-8753751,8753893-8753970,8754378-8754521,
8754829-8755008,8755335-8755394,8755484-8755523,
8758653-8759137
Length = 1294
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 279 IQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGD 410
+Q +NGE N GA+ S+I P K+L E+ RAQD A D
Sbjct: 804 LQLSNGE----NQGASGTGLGSLISPMLKVLDEMYRAQDDLARD 843
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -2
Query: 593 LEQSIFIIQVHWS*HIFDHL*SQLKGFLETIRNYSWMYAFLKKFLSRIQQRTSNNNY*C 417
++Q ++ +Q+ W I ++ LKG ++ NY + A +K + +Q+ N C
Sbjct: 420 IKQEMYALQMTWRDEI-SNIGHDLKGLVDAAENYHKVLAENQKLFNEVQELKGNIRVYC 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,130,230
Number of Sequences: 37544
Number of extensions: 321454
Number of successful extensions: 821
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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