Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23c17
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 250 6e-67
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 250 6e-67
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 175 4e-44
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 175 4e-44
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 175 4e-44
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 148 3e-36
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 148 3e-36
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 146 1e-35
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 146 1e-35
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 146 1e-35
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 145 3e-35
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 145 3e-35
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 143 1e-34
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 115 3e-26
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 115 3e-26
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 99 3e-21
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 63 2e-10
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 56 3e-08
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 28 5.9
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 28 5.9
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 28 5.9
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 28 5.9
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF047657-8|AAK18944.1| 328|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 250 bits (613), Expect = 6e-67
Identities = 122/172 (70%), Positives = 146/172 (84%)
Frame = +3
Query: 168 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 347
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 348 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQL 527
IHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+ LL KGIHPT IS+ FQ A
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAE 142
Query: 528 ALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVM 683
A ++++ MS+PVDL+N+ L K A TSLNSKVVSQHS +LAP+AV A++ ++
Sbjct: 143 AEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKII 194
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 250 bits (613), Expect = 6e-67
Identities = 122/172 (70%), Positives = 146/172 (84%)
Frame = +3
Query: 168 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 347
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 348 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQL 527
IHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+ LL KGIHPT IS+ FQ A
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAE 142
Query: 528 ALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVM 683
A ++++ MS+PVDL+N+ L K A TSLNSKVVSQHS +LAP+AV A++ ++
Sbjct: 143 AEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKII 194
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 175 bits (425), Expect = 4e-44
Identities = 85/161 (52%), Positives = 122/161 (75%)
Frame = +3
Query: 204 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 383
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 384 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPV 563
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156
Query: 564 DLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 686
+ N + L++ A TSL SK+V++ A IAV A+ +V +
Sbjct: 157 PVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVAD 197
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 175 bits (425), Expect = 4e-44
Identities = 85/161 (52%), Positives = 122/161 (75%)
Frame = +3
Query: 204 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 383
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 384 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPV 563
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156
Query: 564 DLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 686
+ N + L++ A TSL SK+V++ A IAV A+ +V +
Sbjct: 157 PVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVAD 197
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 175 bits (425), Expect = 4e-44
Identities = 85/161 (52%), Positives = 122/161 (75%)
Frame = +3
Query: 204 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 383
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 384 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPV 563
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156
Query: 564 DLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 686
+ N + L++ A TSL SK+V++ A IAV A+ +V +
Sbjct: 157 PVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVAD 197
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 148 bits (359), Expect = 3e-36
Identities = 73/163 (44%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Frame = +3
Query: 195 IRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLV 374
IR N+ AA A+A+ +++SLGP G+DKM+ G+V +TNDGATILKQ+ V HPA K+LV
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLV 80
Query: 375 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVV-ENM 551
EL++ QD E GDGTTSVV++A LL A++L+++ +HPT I +G++ A + A++ + EN+
Sbjct: 81 ELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENI 140
Query: 552 STPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
S D +++ AA TS++SK++ + + V A AV
Sbjct: 141 SFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAV 183
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 148 bits (359), Expect = 3e-36
Identities = 73/163 (44%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Frame = +3
Query: 195 IRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLV 374
IR N+ AA A+A+ +++SLGP G+DKM+ G+V +TNDGATILKQ+ V HPA K+LV
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLV 80
Query: 375 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVV-ENM 551
EL++ QD E GDGTTSVV++A LL A++L+++ +HPT I +G++ A + A++ + EN+
Sbjct: 81 ELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENI 140
Query: 552 STPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
S D +++ AA TS++SK++ + + V A AV
Sbjct: 141 SFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAV 183
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 146 bits (354), Expect = 1e-35
Identities = 76/162 (46%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Frame = +3
Query: 198 RLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTITNDGATILKQMSVIHPAAK 365
RLS+ A A+ D ++++LGP+GMDK++ + N G + +TNDGATILK + V +PAAK
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAK 79
Query: 366 MLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVE 545
+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP I G+++AL +A + ++
Sbjct: 80 VLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK 139
Query: 546 NMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAI 671
S N D LLK A T+L SK++SQH A +AV A+
Sbjct: 140 KSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAV 181
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 146 bits (354), Expect = 1e-35
Identities = 76/162 (46%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Frame = +3
Query: 198 RLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTITNDGATILKQMSVIHPAAK 365
RLS+ A A+ D ++++LGP+GMDK++ + N G + +TNDGATILK + V +PAAK
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAK 79
Query: 366 MLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVE 545
+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP I G+++AL +A + ++
Sbjct: 80 VLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK 139
Query: 546 NMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAI 671
S N D LLK A T+L SK++SQH A +AV A+
Sbjct: 140 KSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAV 181
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 146 bits (354), Expect = 1e-35
Identities = 76/162 (46%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Frame = +3
Query: 198 RLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTITNDGATILKQMSVIHPAAK 365
RLS+ A A+ D ++++LGP+GMDK++ + N G + +TNDGATILK + V +PAAK
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAK 79
Query: 366 MLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVE 545
+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP I G+++AL +A + ++
Sbjct: 80 VLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLK 139
Query: 546 NMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAI 671
S N D LLK A T+L SK++SQH A +AV A+
Sbjct: 140 KSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAV 181
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 145 bits (351), Expect = 3e-35
Identities = 70/162 (43%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Frame = +3
Query: 201 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVEL 380
+SNINA + VAD+IRT+LGPRG+DK+I + G TI+NDGATILK + ++ PAA +V++
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTP 560
+R+QD E GDGTTSVVV+A +L + ++ G+HP ++ KA + L+ + ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
Query: 561 VDLNNE--DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
++ E + L+K AAT+L+SK+VSQ A + V A+ +
Sbjct: 143 INGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL 184
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 145 bits (351), Expect = 3e-35
Identities = 70/162 (43%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Frame = +3
Query: 201 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVEL 380
+SNINA + VAD+IRT+LGPRG+DK+I + G TI+NDGATILK + ++ PAA +V++
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 381 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTP 560
+R+QD E GDGTTSVVV+A +L + ++ G+HP ++ KA + L+ + ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
Query: 561 VDLNNE--DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
++ E + L+K AAT+L+SK+VSQ A + V A+ +
Sbjct: 143 INGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAVNTL 184
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 143 bits (347), Expect = 1e-34
Identities = 66/163 (40%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Frame = +3
Query: 195 IRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLV 374
+++ NINA K +AD IRTSLGPR M KM+ G + +TNDG IL++++V HPAAK ++
Sbjct: 24 VQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMI 83
Query: 375 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVEN-M 551
E++R QD E GDGTTSV+++AG ++ A+ L++ HPT+I +++AL+ +Q EN
Sbjct: 84 EIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKF 143
Query: 552 STPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 680
S VD+ ++ + K + L +K++S+ + I++QA++ +
Sbjct: 144 SKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTI 186
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 115 bits (277), Expect = 3e-26
Identities = 58/159 (36%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 386
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ + S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVD 566
AQD GDGTTS V++ G LL AE L+ +G+HP ++++GF+ A L+++E
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAP 142
Query: 567 LNNEDALLKAAATSLNSKV---VSQHSTILAPIAVQAIR 674
+ D L++ T+L +K+ ++ H T AV AIR
Sbjct: 143 V-ERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 115 bits (277), Expect = 3e-26
Identities = 58/159 (36%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 386
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ + S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENMSTPVD 566
AQD GDGTTS V++ G LL AE L+ +G+HP ++++GF+ A L+++E
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKFKKEAP 142
Query: 567 LNNEDALLKAAATSLNSKV---VSQHSTILAPIAVQAIR 674
+ D L++ T+L +K+ ++ H T AV AIR
Sbjct: 143 V-ERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIR 180
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 99.1 bits (236), Expect = 3e-21
Identities = 49/156 (31%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Frame = +3
Query: 207 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 386
NI A +A IR++ GP GM+KM+ ++ +TND ATILK++ + HPAA++++ +
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATE 90
Query: 387 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQVVENM--STP 560
Q+ + GD T +VV++A ALL+ A L+ G+ P ++ G+++A + AL+++ +
Sbjct: 91 MQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEA 150
Query: 561 VDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQA 668
D+ N + + + +++ SK + I+A + +A
Sbjct: 151 TDMKNIEEVRQYIRSAITSKQY-DNEDIIADLVAKA 185
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Frame = +3
Query: 162 SVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM 341
S KD + R + + +ADA+ ++GP+G + +I+ + G IT DG T+ K +
Sbjct: 16 SYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSI 75
Query: 342 SV----IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGF 509
+ + AK++ +++ + EAGDGTT V+A A+ + +++G + I G
Sbjct: 76 DLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGV 135
Query: 510 QKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVV 626
A+++ + ++ +S V E + + A S N V
Sbjct: 136 MNAVEVVVAELKKISKKVTTPEE--IAQVATISANGDTV 172
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Frame = +3
Query: 162 SVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQM 341
S KD + R + + +ADA+ ++GP+G + +I+ + G IT DG T+ K +
Sbjct: 16 SYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSI 75
Query: 342 SV----IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALL-DSAEKLLQKGIHPTVISDG 506
+ + AK++ +++ + EAGDGTT V+ A+ + E+ +G + I G
Sbjct: 76 DLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRG-NAVEIRRG 134
Query: 507 FQKALQLALQVVENMSTPVDLNNEDALLKAAATSLNSKVV 626
A+++ + ++ +S V E + + A S N V
Sbjct: 135 VMNAVEVVVAELKKISKKVTTPEE--IAQVATISANGDTV 172
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 581 CFAQGSCNITKFQSSFTTLNYFGTH 655
C Q C+ KF++SF +NYF H
Sbjct: 681 CGKQTWCDSGKFENSFDLINYFSAH 705
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 321 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 467
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 321 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 467
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 321 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 467
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 338 NECYSSSCKNVGRIISCSRY*SW*WNNISSCYC 436
N + SC+ R SCSR SW SS +C
Sbjct: 9 NYAFEDSCRKSTRTSSCSRRDSWNGETRSSSHC 41
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 501 DGFQKALQLALQVVENMSTPVDLNNE--DALLKAAATSLNSKVVSQHS 638
D +K L+ ++V MST +D NNE AL+K N K +QHS
Sbjct: 215 DDQEKTLEAIKKLVLGMSTLIDTNNETHTALMKELYNRENQK--AQHS 260
>AF047657-8|AAK18944.1| 328|Caenorhabditis elegans Hypothetical
protein F37B4.10 protein.
Length = 328
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 581 CFAQGSCN-ITKFQSSFTTLNYFGTHCSASNSSSNGTYC*WCWC 709
C+A+ + KF T++ FGT +SSS C W C
Sbjct: 14 CYAREKVECLEKFTKRVNTIDSFGTSFLVMSSSSQNIKCGWNGC 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,175,982
Number of Sequences: 27780
Number of extensions: 305013
Number of successful extensions: 979
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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