Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23c16
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...   135   7e-34
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    25   0.86 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N p...    23   6.1  
AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N p...    23   6.1  
AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N p...    23   6.1  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   8.0  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score =  135 bits (326), Expect = 7e-34
 Identities = 63/83 (75%), Positives = 72/83 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI+DASVY  + LPKLYAKLHYCVSCAIHSKVVRNRSK+ 
Sbjct: 31  KDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKET 90

Query: 319 RRIRTPPKSNFPRDMSRPQAVQR 387
           RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 91  RRIRTPPQRSFPKDMNRQQNAQR 113



 Score = 74.5 bits (175), Expect = 1e-15
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +2

Query: 56  KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           +RRNGGR KH RGHVKAVRCTNCARCVPKDKAIK
Sbjct: 3   ERRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIK 36


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 14  RSLFTGSEVRNMTRKRRNGGRAKHGRGHVKAVRCTNCARCV 136
           R L  G  VR      R+    + G  + KAV CTN  +C+
Sbjct: 238 RCLERGHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVKCL 278


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 285 QQSCQEQIEERQKNPYSSQ 341
           QQ  Q+Q ++RQ+ P S Q
Sbjct: 254 QQLSQQQQQQRQRQPSSQQ 272


>AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 228 HWVYRGIVNISDRRRFYDVPNHELLIALSFGTHRAQ 121
           H++YRG V  SDR  +  +  H   +  S GT ++Q
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH---VHQSVGTVQSQ 93


>AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 228 HWVYRGIVNISDRRRFYDVPNHELLIALSFGTHRAQ 121
           H++YRG V  SDR  +  +  H   +  S GT ++Q
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH---VHQSVGTVQSQ 93


>AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 228 HWVYRGIVNISDRRRFYDVPNHELLIALSFGTHRAQ 121
           H++YRG V  SDR  +  +  H   +  S GT ++Q
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH---VHQSVGTVQSQ 93


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 317 TEESVLLPRVTSLGTCHVHRQ 379
           T+ S+  PR+T   T HV+ +
Sbjct: 176 TDGSIFPPRITKNSTLHVYEK 196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,625
Number of Sequences: 2352
Number of extensions: 8256
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)