SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23c16
         (428 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69654-1|CAA49345.1|  115|Homo sapiens ribosomal protein S26 pro...   106   3e-23
U41448-1|AAC26987.1|  115|Homo sapiens ribosomal protein S26 pro...   106   3e-23
BC105798-1|AAI05799.1|  115|Homo sapiens ribosomal protein S26 p...   106   3e-23
BC105276-1|AAI05277.1|  115|Homo sapiens ribosomal protein S26 p...   106   3e-23
BC070220-1|AAH70220.1|  115|Homo sapiens ribosomal protein S26 p...   106   3e-23
BC015832-1|AAH15832.1|  115|Homo sapiens ribosomal protein S26 p...   106   3e-23
BC002604-1|AAH02604.1|  115|Homo sapiens ribosomal protein S26 p...   106   3e-23
AL136526-7|CAI39559.1|  115|Homo sapiens protein ( for propionyl...   106   4e-23
X77770-1|CAA54808.1|  115|Homo sapiens ribosomal protein S26 pro...   105   8e-23
AC073072-2|AAS07540.1|  115|Homo sapiens unknown protein.             101   1e-21
AL929401-1|CAI40435.1|  115|Homo sapiens ribosomal protein S26-l...   100   2e-21
AB007161-1|BAA25824.1|   45|Homo sapiens ribosomal protein S26 p...    69   9e-12
AB007160-1|BAA25823.1|   23|Homo sapiens ribosomal protein S26 p...    41   0.002
X79236-1|CAA55818.1|   20|Homo sapiens ribosomal protein S26 pro...    37   0.025
X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.       31   2.2  
U12767-1|AAB02581.1|  587|Homo sapiens mitogen induced nuclear o...    31   2.2  
S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.                    31   2.2  
D85242-1|BAA31221.1|  143|Homo sapiens NOR-1 3'-variant protein.       31   2.2  
D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan rec...    31   2.2  
AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfam...    31   2.2  
AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfam...    31   2.2  
AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfam...    31   2.2  
AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfam...    31   2.2  
AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfam...    31   2.2  
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.      29   5.1  
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.                  29   6.7  

>X69654-1|CAA49345.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>U41448-1|AAC26987.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>BC105798-1|AAI05799.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>BC105276-1|AAI05277.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>BC070220-1|AAH70220.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>BC015832-1|AAH15832.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>BC002604-1|AAH02604.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>AL136526-7|CAI39559.1|  115|Homo sapiens protein ( for propionyl
           Coenzyme A  ).).
          Length = 115

 Score =  106 bits (254), Expect = 4e-23
 Identities = 49/67 (73%), Positives = 57/67 (85%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K    +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSCAIHSKVVRNRS++ 
Sbjct: 32  KDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIK 37


>X77770-1|CAA54808.1|  115|Homo sapiens ribosomal protein S26
           protein.
          Length = 115

 Score =  105 bits (251), Expect = 8e-23
 Identities = 48/67 (71%), Positives = 57/67 (85%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K +  +KFVIRNIVEAAAVRDI++ASV+  + LPKLY KLHYCVSC IHSKVVRNRS++ 
Sbjct: 32  KDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCVIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIK
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIK 37


>AC073072-2|AAS07540.1|  115|Homo sapiens unknown protein.
          Length = 115

 Score =  101 bits (241), Expect = 1e-21
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = +1

Query: 139 KGQGYQKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKD 318
           K    +KFVIRNIVEAAAVRDI++ASV+  + LPKL  KLHYCVSC IHSKVVRNRS++ 
Sbjct: 32  KDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLCVKLHYCVSCVIHSKVVRNRSREA 91

Query: 319 RRIRTPP 339
           R+ RTPP
Sbjct: 92  RKDRTPP 98



 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN  RAK GRGHV+ +RCTNCARCVPKD AIK
Sbjct: 1   MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIK 37


>AL929401-1|CAI40435.1|  115|Homo sapiens ribosomal protein S26-like
           1 protein.
          Length = 115

 Score =  100 bits (239), Expect = 2e-21
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = +1

Query: 154 QKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRT 333
           +KFVIRNIVEAAAVRDI++ SV+  + LPKLY KLHYCVSCAIHSKVVRNRS++  + RT
Sbjct: 37  KKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRT 96

Query: 334 PP 339
           PP
Sbjct: 97  PP 98



 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 157
           MT+KRRN   AK GRGHV+ +RCTNC RCVP DKAIK
Sbjct: 1   MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIK 37


>AB007161-1|BAA25824.1|   45|Homo sapiens ribosomal protein S26
           protein.
          Length = 45

 Score = 68.5 bits (160), Expect = 9e-12
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +1

Query: 229 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 339
           + LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1   YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37


>AB007160-1|BAA25823.1|   23|Homo sapiens ribosomal protein S26
           protein.
          Length = 23

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 19/22 (86%), Positives = 22/22 (100%)
 Frame = +1

Query: 157 KFVIRNIVEAAAVRDINDASVY 222
           KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1   KFVIRNIVEAAAVRDISEASVF 22


>X79236-1|CAA55818.1|   20|Homo sapiens ribosomal protein S26
           protein.
          Length = 20

 Score = 37.1 bits (82), Expect = 0.025
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 47  MTRKRRNGGRAKHGRGHVK 103
           MT+KRRN GRAK GRGHV+
Sbjct: 1   MTKKRRNNGRAKKGRGHVQ 19


>X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.
          Length = 443

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389


>U12767-1|AAB02581.1|  587|Homo sapiens mitogen induced nuclear
           orphan receptor protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350


>S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.
          Length = 684

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447


>D85242-1|BAA31221.1|  143|Homo sapiens NOR-1 3'-variant protein.
          Length = 143

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 46  YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89


>D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan
           receptor protein.
          Length = 626

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389


>AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 443

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389


>AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389


>AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400


>AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389


>AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 247 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMSRP 372
           Y +   C+S  +  +VVR  S K RR R P  PKS   ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400


>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
          Length = 1181

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 196 RDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 303
           R +     YPMFQ+P+    LH  ++   H  V RN
Sbjct: 372 RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407


>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
          Length = 1275

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 196 RDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 303
           R +     YPMFQ+P+    LH  ++   H  V RN
Sbjct: 372 RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERN 407


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,603,952
Number of Sequences: 237096
Number of extensions: 1049870
Number of successful extensions: 2257
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -