Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23b18
(426 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 122 3e-27
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 111 6e-24
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 67 1e-10
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 62 4e-09
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 56 2e-07
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 50 3e-05
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.012
UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3; ... 32 5.7
UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3; D... 32 5.7
UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1; ... 31 9.9
UniRef50_Q20043 Cluster: Putative uncharacterized protein; n=2; ... 31 9.9
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 122 bits (294), Expect = 3e-27
Identities = 55/60 (91%), Positives = 58/60 (96%)
Frame = -3
Query: 418 LLNDKVIYLQNXNKNKLFELSGLSLKSCRXDFVTVESQTRAGDEIASFLRYCRMCGMSGC 239
+LNDKVIYLQN NKNKLFELSGLSLKSCR DFVTVESQTRAGDEIASF+RYCR+CGMSGC
Sbjct: 206 ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIRYCRLCGMSGC 265
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 111 bits (267), Expect = 6e-24
Identities = 49/66 (74%), Positives = 50/66 (75%)
Frame = -1
Query: 201 MNGSWXFCMCEVYPGGVCNPSXCVCV*YRLKNGAGVSNHMWXRLKNDDGDDKPCLNCVIY 22
MNGSW FCMC VYPGGVCNPS C CV SNHMW RLKN DGDDKPCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 21 VAVVFT 4
VAV+FT
Sbjct: 51 VAVIFT 56
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 67.3 bits (157), Expect = 1e-10
Identities = 29/58 (50%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Frame = -3
Query: 418 LLNDKVIYLQNXN---KNKLFELSGLSLKSCRXDFVTVESQTRAGDEIASFLRYCRMC 254
+L D++I + N K KL+ ++G+SL++C+ FVTVE QTRAGDEI SF++YC++C
Sbjct: 249 ILTDELILFKPINSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFIKYCQIC 306
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 62.5 bits (145), Expect = 4e-09
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 418 LLNDKVIYLQNXN-----KNKLFELSGLSLKSCRXDFVTVESQTRAGDEIASFLRYCRMC 254
LL+D+VIYL N N + L SG SL C + TVE QTRAGDE+ SF+RYC +C
Sbjct: 200 LLSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIRYCELC 259
Query: 253 GM 248
M
Sbjct: 260 QM 261
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 56.4 bits (130), Expect = 2e-07
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -3
Query: 376 NKLFELSGLSLKSCRXDFVTVESQTRAGDEIASFLRYCRMCGM 248
++L +SG+SL C+ +FV VE Q RAGDE SF+R+C+ CG+
Sbjct: 254 DRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFIRHCKRCGL 296
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 49.6 bits (113), Expect = 3e-05
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = -3
Query: 382 NKNKLFELSGLSLKSCRXDFVTVESQTRAGDEIASFLRYCRMCG 251
+++ L L+G ++ SC D+V E Q RAGDE+ SF+++C+ CG
Sbjct: 195 SQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKFCKKCG 238
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 42 MVYRRRRRSSTGATYGLT 95
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3;
Dehalococcoides|Rep: Putative uncharacterized protein -
Dehalococcoides sp. BAV1
Length = 193
Score = 31.9 bits (69), Expect = 5.7
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 285 SLRSFATVGCVECLAVNSSVFCNFGGLSMNGSWXFCMCEVYPGGVCNPSXCVCV*YRLKN 106
+L +F + VE +AV ++ C GL C+ + +CN C CV YRLK+
Sbjct: 101 TLENFKPISRVEAMAVITT--CQQAGLMTT----LVHCKEHFYSICNCCRCCCVPYRLKH 154
Query: 105 GAGV 94
G+
Sbjct: 155 QYGI 158
>UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3;
Drosophila melanogaster|Rep: Putative gustatory receptor
22b - Drosophila melanogaster (Fruit fly)
Length = 386
Score = 31.9 bits (69), Expect = 5.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 281 FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 192
F SLL ++W+ WL I AC +T A TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317
>UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1;
Tetrahymena thermophila SB210|Rep: transcription factor
S-II - Tetrahymena thermophila SB210
Length = 356
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -3
Query: 397 YLQNXNKNKLFELSGLSLKSCRXD--FVTVESQTRAGDEIASFLRYCRMCGMS 245
+ N + +L L G K C+ F+ E QTR+ DE + C CG S
Sbjct: 301 FYNNMRRQRLQGLEGELCKGCKKKTAFLVKELQTRSSDEPMTRFMECNSCGKS 353
>UniRef50_Q20043 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 256
Score = 31.1 bits (67), Expect = 9.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = -1
Query: 261 GCVECLAVNSSVFCN----FGGLSMNGSWXFCMCEV-YPGGVCN-PSXC 133
G EC + +FCN F G+ G FC+C+V Y G C+ P C
Sbjct: 101 GKCECFERWTGLFCNMRTCFNGIPTGGLDGFCLCDVGYTGPFCDAPLIC 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 349,117,237
Number of Sequences: 1657284
Number of extensions: 5979020
Number of successful extensions: 13330
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13327
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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