Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23b08
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.   204   2e-54
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.   204   2e-54
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.   204   2e-54
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.   204   2e-54
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    28   0.28 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.84 
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   7.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.9  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   7.9  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  204 bits (498), Expect = 2e-54
 Identities = 95/122 (77%), Positives = 100/122 (81%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 760
           NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+  P+YGD
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 761 LN 766
           LN
Sbjct: 121 LN 122


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  204 bits (498), Expect = 2e-54
 Identities = 95/122 (77%), Positives = 100/122 (81%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 760
           NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+  P+YGD
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 761 LN 766
           LN
Sbjct: 121 LN 122


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  204 bits (498), Expect = 2e-54
 Identities = 95/122 (77%), Positives = 100/122 (81%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 760
           NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+  P+YGD
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 761 LN 766
           LN
Sbjct: 121 LN 122


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  204 bits (498), Expect = 2e-54
 Identities = 95/122 (77%), Positives = 100/122 (81%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 760
           NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+  P+YGD
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120

Query: 761 LN 766
           LN
Sbjct: 121 LN 122


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 593 VVPSPKVSDTVVEPYNATLSVHQLVENTDETY 688
           V P  + S    +P N T  VHQ  +N DET+
Sbjct: 236 VYPDEEKSGETDDPDNPTYLVHQHTQNLDETF 267


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 89  MREIVHIQAGQCGNQIGAKFWE 154
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +2

Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 424
           +P   +  L  G+ +S     FG  F    RP N+ + ++   NN  + H T  A L
Sbjct: 106 LPSLAITGLSIGSSNSSFLRQFGPQFTGTKRPQNWFYSRNNNNNNNNEHHNTYNARL 162


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
          protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 61 YLTLKICSARSTHCRGR 11
          YLT    S R THC GR
Sbjct: 12 YLTHDSPSVRKTHCTGR 28


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 362 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
           FG    G +   G YT  +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,209
Number of Sequences: 2352
Number of extensions: 15439
Number of successful extensions: 58
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)