Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23a13
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...   291   2e-80
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.3  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   5.7  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   5.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   7.6  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    23   7.6  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   7.6  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   7.6  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    23   7.6  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   7.6  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    23   7.6  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   7.6  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score =  291 bits (714), Expect = 2e-80
 Identities = 127/194 (65%), Positives = 147/194 (75%)
 Frame = +3

Query: 3    LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
            LY+DGN+  HNQDLG AGSCVRKFST+P L C  N+VCNYASRNDR++WLST  PIPMMP
Sbjct: 831  LYVDGNDYPHNQDLGSAGSCVRKFSTLPILACGQNNVCNYASRNDRTFWLSTSAPIPMMP 890

Query: 183  VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
            V    +  YISRC VCE P NVIAVHSQTL IP CP GW+ LWIGYSF+MHT        
Sbjct: 891  VTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECPNGWDGLWIGYSFLMHTAVGHGGGG 950

Query: 363  XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
              L+ PGSCLEDFR+ PFIECNG  G CH++  + SFWL ++ED QQF  PE+QTLK+G 
Sbjct: 951  QSLSGPGSCLEDFRATPFIECNGGKGHCHYYETQTSFWLVSLEDHQQFQRPEQQTLKAGN 1010

Query: 543  LLERVSRCAVCIKN 584
            LL RVSRC VCI++
Sbjct: 1011 LLSRVSRCQVCIRH 1024



 Score = 58.4 bits (135), Expect = 2e-10
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
 Frame = +3

Query: 258  HSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIECNGEG 437
            HSQ+ ++P C  G  +LW GYS +++           L S GSC+  F ++P + C G+ 
Sbjct: 808  HSQSDEVPVCEPGHLKLWDGYS-LLYVDGNDYPHNQDLGSAGSCVRKFSTLPILAC-GQN 865

Query: 438  GTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
              C++ + N  +FWL+T        V E       ++   +SRC VC
Sbjct: 866  NVCNYASRNDRTFWLSTSAPIPMMPVTE------NEMRPYISRCTVC 906


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -1

Query: 219 ILKYIWQYFVP-QQASLVLVDQWITNNYGRYDLRNYRHHLSHK 94
           +L+YI Q  V  Q  SL++VD+    NYGR +L      L+H+
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDE-CHKNYGRQELWEICARLTHQ 174


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 111 HHLSHKIGMALY*TFSHKNQH 49
           HHLSH  G A   T  H +QH
Sbjct: 707 HHLSHHHGGAAAATGHHHHQH 727


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 102 LNDVCNYASRNDRSYWLSTGQPIPMMP 182
           L + CN+ +    +YW +T  P+   P
Sbjct: 406 LEEACNHLAEYLEAYWRATHPPVRPTP 432


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 198 FREDIGVNMHHWHW 211


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 402 RSIPFIECNGEGGTCHHFANK 464
           R+IP+    G G T H+F NK
Sbjct: 490 RNIPYTFHLGSGETNHNFTNK 510


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 197 FREDIGVNLHHWHW 210


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 199 FREDIGVNLHHWHW 212


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 213 FREDIGVNLHHWHW 226


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 212 FREDIGVNLHHWHW 225


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 199 FREDIGVNLHHWHW 212


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 197 FREDIGVNLHHWHW 210


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 206 FGNILSLNRHHWYW 165
           F   + +N HHW+W
Sbjct: 198 FREDIGVNLHHWHW 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,819
Number of Sequences: 2352
Number of extensions: 17468
Number of successful extensions: 44
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)