Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23a13
(747 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 280 2e-75
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 280 2e-75
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 280 2e-75
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 272 3e-73
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 272 3e-73
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 272 3e-73
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 272 4e-73
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 216 3e-56
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 216 3e-56
AE014297-1562|AAF54844.1| 435|Drosophila melanogaster CG6753-PA... 29 5.1
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 280 bits (686), Expect = 2e-75
Identities = 120/196 (61%), Positives = 146/196 (74%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1584 LYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1643
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1644 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 1703
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 1704 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 1764 RQSHVSRCQVCMKNSS 1779
Score = 67.3 bits (157), Expect = 2e-11
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L SPGSC+ F ++P + C
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC 1615
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 1616 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 280 bits (686), Expect = 2e-75
Identities = 120/196 (61%), Positives = 146/196 (74%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1584 LYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1643
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1644 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 1703
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 1704 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 1764 RQSHVSRCQVCMKNSS 1779
Score = 67.3 bits (157), Expect = 2e-11
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L SPGSC+ F ++P + C
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC 1615
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 1616 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 280 bits (686), Expect = 2e-75
Identities = 120/196 (61%), Positives = 146/196 (74%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1584 LYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1643
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1644 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 1703
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 1704 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1763
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 1764 RQSHVSRCQVCMKNSS 1779
Score = 67.3 bits (157), Expect = 2e-11
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L SPGSC+ F ++P + C
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSC 1615
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 1616 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1659
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 272 bits (668), Expect = 3e-73
Identities = 119/196 (60%), Positives = 145/196 (73%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1583 LYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1639
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1640 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 1699
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 1700 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1759
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 1760 RQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 3e-08
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L GSC+ F ++P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 1612 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 272 bits (668), Expect = 3e-73
Identities = 119/196 (60%), Positives = 145/196 (73%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1583 LYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1639
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1640 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 1699
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 1700 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1759
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 1760 RQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 3e-08
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L GSC+ F ++P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 1612 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 272 bits (668), Expect = 3e-73
Identities = 119/196 (60%), Positives = 145/196 (73%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 1583 LYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 1639
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1640 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 1699
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 1700 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGE 1759
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 1760 RQSHVSRCQVCMKNSS 1775
Score = 56.8 bits (131), Expect = 3e-08
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L GSC+ F ++P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 1612 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 272 bits (666), Expect = 4e-73
Identities = 119/196 (60%), Positives = 145/196 (73%)
Frame = +3
Query: 3 LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMP 182
LY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYASRND+++WL+T IPMMP
Sbjct: 229 LYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTTNAAIPMMP 285
Query: 183 VEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXX 362
VE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 286 VENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGG 345
Query: 363 XXLASPGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQ 542
L SPGSCLEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+
Sbjct: 346 QALQSPGSCLEDFRATPFIECNGAKGTCHFYETITSFWMYNLESSQPFERPQQQTIKAGE 405
Query: 543 LLERVSRCAVCIKNTT 590
VSRC VC+KN++
Sbjct: 406 RQSHVSRCQVCMKNSS 421
Score = 56.8 bits (131), Expect = 3e-08
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+I HSQ+ +P+C G ELW GYS +++ L GSC+ F ++P + C
Sbjct: 202 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 257
Query: 426 NGEGGTCHHFA-NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVC 575
G+ C++ + N +FWLTT +P +++ ++ + +SRC VC
Sbjct: 258 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 301
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 216 bits (527), Expect = 3e-56
Identities = 92/186 (49%), Positives = 128/186 (68%), Gaps = 2/186 (1%)
Frame = +3
Query: 24 KAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM--PVEGQN 197
+A QDLG +GSC+ +F+TMP++ CD+ +VC++A ND S WLST +P+PM P++G++
Sbjct: 1549 RAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRD 1608
Query: 198 IAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLAS 377
+ KYISRCVVCE +IA+HSQ++ IP CP GW E+W GYS+ M T L S
Sbjct: 1609 LMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVS 1668
Query: 378 PGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERV 557
PGSCLE+FR+ P IEC+G G C+++ SFWLT +E+ QF P +QTLK+ ++
Sbjct: 1669 PGSCLEEFRAQPVIECHGH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKA-DFTSKI 1726
Query: 558 SRCAVC 575
SRC VC
Sbjct: 1727 SRCTVC 1732
Score = 61.3 bits (142), Expect = 1e-09
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+ A HSQ++ +P CP N LW GYS + L GSC+ F ++P++ C
Sbjct: 1515 IFARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLC 1573
Query: 426 NGEGGTCHHFA--NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVCIKNT 587
+ C HFA N S WL+T E P ++ L++ +SRC VC T
Sbjct: 1574 D-ITNVC-HFAQNNDDSLWLSTAEPMPMTMTP----IQGRDLMKYISRCVVCETTT 1623
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 216 bits (527), Expect = 3e-56
Identities = 92/186 (49%), Positives = 128/186 (68%), Gaps = 2/186 (1%)
Frame = +3
Query: 24 KAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMM--PVEGQN 197
+A QDLG +GSC+ +F+TMP++ CD+ +VC++A ND S WLST +P+PM P++G++
Sbjct: 1551 RAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQGRD 1610
Query: 198 IAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLAS 377
+ KYISRCVVCE +IA+HSQ++ IP CP GW E+W GYS+ M T L S
Sbjct: 1611 LMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVS 1670
Query: 378 PGSCLEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERV 557
PGSCLE+FR+ P IEC+G G C+++ SFWLT +E+ QF P +QTLK+ ++
Sbjct: 1671 PGSCLEEFRAQPVIECHGH-GRCNYYDALASFWLTVIEEQDQFVQPRQQTLKA-DFTSKI 1728
Query: 558 SRCAVC 575
SRC VC
Sbjct: 1729 SRCTVC 1734
Score = 61.3 bits (142), Expect = 1e-09
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 246 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRSIPFIEC 425
+ A HSQ++ +P CP N LW GYS + L GSC+ F ++P++ C
Sbjct: 1517 IFARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLC 1575
Query: 426 NGEGGTCHHFA--NKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCAVCIKNT 587
+ C HFA N S WL+T E P ++ L++ +SRC VC T
Sbjct: 1576 D-ITNVC-HFAQNNDDSLWLSTAEPMPMTMTP----IQGRDLMKYISRCVVCETTT 1625
>AE014297-1562|AAF54844.1| 435|Drosophila melanogaster CG6753-PA
protein.
Length = 435
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 380 WIVLRRFP-FDSIYRV*WRRWNLSSF 454
W +L R P +++Y+V W+RWN F
Sbjct: 384 WRLLTRLPNVEAVYKVPWKRWNHFDF 409
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,326,759
Number of Sequences: 53049
Number of extensions: 687530
Number of successful extensions: 1486
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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