Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22p16
(756 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 50 4e-07
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos... 33 0.044
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 28 1.3
SPAC1687.20c |mis6||inner centromere protein Mis6|Schizosaccharo... 28 1.7
SPCC4B3.06c |||NADPH-dependent FMN reductase |Schizosaccharomyce... 27 2.2
SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces pombe... 27 2.2
SPAC23C11.17 |||mitochondrial inner membrane protein involved in... 27 3.8
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 6.7
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 26 6.7
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 25 8.8
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 50.0 bits (114), Expect = 4e-07
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +3
Query: 231 YDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTG 410
YD F G+ +K++ T+P S+V+EFID EE E ++ VHC G+ RTG
Sbjct: 238 YDKKTFENVGIRHKEMYFEDGTVPELSLVKEFIDLTEEVEE---DGVIAVHCKAGLGRTG 294
Query: 411 YMVCRYLMHTLGIAPQEAI 467
++ YL++ E I
Sbjct: 295 CLIGAYLIYKHCFTANEVI 313
>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
5-trisphosphate3-phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 33.1 bits (72), Expect = 0.044
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 360 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRF-EK--ARGH 494
P + + VHC G RTG ++C YL+ G+ ++++ + EK RGH
Sbjct: 121 PLLTLVVHCKAGKGRTGTVICSYLVAFGGLTAKQSLELYTEKRMVRGH 168
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 378 VHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYVQ 521
VHC GI+R+ +V YLM +EA++ + R N+++
Sbjct: 129 VHCFAGISRSVTLVAAYLMKENNWNTEEALSHINERRSGISPNANFLR 176
>SPAC1687.20c |mis6||inner centromere protein
Mis6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 150 DVWTTEQIVKQNPSIGAIIDLTNTSKYY---DGVHFLRAGLLYKKIQVPGQ 293
+ W++E+ +Q+ I +I + NTS Y + + GL+Y+KI P +
Sbjct: 237 ETWSSEKRKRQSSLIPDLITMKNTSSSYSLEELTSVQQMGLVYEKIVFPSR 287
>SPCC4B3.06c |||NADPH-dependent FMN reductase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 200
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 255 AGLLYKKIQ--VPGQTLPSESIVQEFIDTVEEFTE 353
AG L ++ +P TLP + IVQ +D EFT+
Sbjct: 142 AGFLKMRVAPTMPALTLPRDKIVQGVVDPAVEFTK 176
>SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 264
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 664 WNNATDRLQSKRSKRSISFDSLEEAQQF 581
W+ A+D+++ R FDS E AQ+F
Sbjct: 23 WDEASDQVKGYGGNRYKKFDSYEAAQEF 50
>SPAC23C11.17 |||mitochondrial inner membrane protein involved in
potassium ion transport|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 738 AKSTNVTSTL--PTLWWRISGLILPSIGTTPLIGYKVNVASE 619
A+ T T+ + P++W R+ G +L T L+G ++ ++S+
Sbjct: 104 AEETKPTTVVKKPSIWQRVKGGVLHFWDGTKLLGVEIKISSK 145
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 687 IFSTTMLAASMLRLCFWLSTYVF 755
I TM+ LR +WLST +F
Sbjct: 702 IMQLTMMGLMSLRKAYWLSTVIF 724
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 727 KRNIDAANIVVENIRPNPTVDW 662
KR + AN EN++P P DW
Sbjct: 288 KRKAENANRAAENLQPLPLDDW 309
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 732 STNVTSTLPTLWWRISG 682
STN TS LP+ W ++G
Sbjct: 180 STNTTSALPSSGWNVTG 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,122,754
Number of Sequences: 5004
Number of extensions: 64515
Number of successful extensions: 185
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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