Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22p14
(736 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1048 + 25675563-25675760,25676995-25677051,25677132-256773... 161 4e-40
10_08_0045 + 14407892-14408068,14408759-14408815,14408899-144091... 155 5e-38
03_02_0194 + 6322499-6322654,6323540-6323596,6323702-6323907,632... 155 5e-38
01_06_0875 - 32650150-32650350,32650464-32650788,32650872-326510... 139 2e-33
08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,302... 29 2.9
01_07_0171 + 41683670-41683872,41684386-41684483,41684614-416846... 29 2.9
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 29 3.8
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 28 6.7
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 28 6.7
12_02_0645 + 21475126-21475293,21475386-21475538,21478101-214782... 28 8.8
04_04_0081 + 22601090-22601395,22601714-22602522,22602584-22602611 28 8.8
04_03_0717 - 18999057-18999175,18999267-18999303,18999453-189996... 28 8.8
01_05_0590 + 23480381-23481169 28 8.8
>12_02_1048 +
25675563-25675760,25676995-25677051,25677132-25677331,
25677412-25677541,25677642-25677845,25678017-25678088,
25678379-25678546
Length = 342
Score = 161 bits (392), Expect = 4e-40
Identities = 84/191 (43%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
Frame = +3
Query: 165 VLDGGFSTQLTCHAGHTADGDPLWSARFLKTHPQDVINTHLDFLRAGSDIIETNTYQASV 344
V+DGG +T+L + DPLWSA+ L + P V HLD+L AG++II T +YQA++
Sbjct: 31 VMDGGLATELEANGADL--NDPLWSAKCLLSSPHLVRKVHLDYLEAGANIIITASYQATI 88
Query: 345 DGFVKHLNLTVEESYELIKSAVEFARTARDLYLQECQESNLSGRKPLIAGSVGPYGAYLH 524
GF + + E+S +L+ +VE AR ARD++L+E + + L+A S+G YGAYL
Sbjct: 89 QGF-ESKGFSKEQSEDLLAKSVEIAREARDMFLKEHSDRPIQ-HPILVAASIGSYGAYLA 146
Query: 525 DTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEALVEILKEYP- 701
D SEY+G+Y + T E +K++H+ R++ L EAG D++AFETIP + EA+A VE+L E
Sbjct: 147 DGSEYSGDYGEAGTLEFLKDFHKRRLEVLAEAGPDLIAFETIPNKLEAQAYVELLDECNI 206
Query: 702 NMKAWLSFSCK 734
++ AW SF+ K
Sbjct: 207 SIPAWFSFNSK 217
>10_08_0045 +
14407892-14408068,14408759-14408815,14408899-14409125,
14409271-14409400,14409848-14410051,14410127-14410198,
14410468-14410608
Length = 335
Score = 155 bits (375), Expect = 5e-38
Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 9/213 (4%)
Frame = +3
Query: 123 EIMSNFEVSSKTVFVLDGGFSTQLTCHAGHTADGDPLWSARFLKTHPQDVINTHLDFLRA 302
++M+ F S V+DGG +T+L + D LWSAR L T P + HLD+L A
Sbjct: 10 DMMAEFLRGSGGAAVIDGGLATELEANGADLKDA--LWSARCLFTCPDLIRKVHLDYLEA 67
Query: 303 GSDIIETNTYQASVDGFVKHLNLTVEESYELIKSAVEFARTARDLYLQECQESNLSGR-- 476
G+ ++ T +YQA++ GF+ + EES ++ +VE A AR +YL++C + +
Sbjct: 68 GASVLITGSYQATIQGFLSK-GFSQEESESFLRRSVELACEARAIYLEKCSNGSDEAKDV 126
Query: 477 -----KP-LIAGSVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILA 638
+P LIA SVG YGAYL D SEY+G+Y + T E +KN+H R+Q L EAG D++
Sbjct: 127 TKYRKRPILIAASVGSYGAYLADGSEYSGDYGNEGTLEFLKNFHLRRLQVLAEAGPDVIV 186
Query: 639 FETIPCQKEAEALVEILKEYP-NMKAWLSFSCK 734
FETIP + E +A VE+L+E + AW F+ K
Sbjct: 187 FETIPNKIETQAYVELLEECKLRIPAWFGFTSK 219
>03_02_0194 +
6322499-6322654,6323540-6323596,6323702-6323907,
6324028-6324157,6324285-6324488,6324599-6324670,
6324844-6325008
Length = 329
Score = 155 bits (375), Expect = 5e-38
Identities = 79/190 (41%), Positives = 123/190 (64%), Gaps = 2/190 (1%)
Frame = +3
Query: 165 VLDGGFSTQLTCHAGHTADGDPLWSARFLKTHPQDVINTHLDFLRAGSDIIETNTYQASV 344
V+DGGF+TQL DPLWSA L T P + H+ +L AG+D+I +++YQA++
Sbjct: 17 VIDGGFATQLEALGADI--NDPLWSAACLITKPHLIKEVHMQYLEAGADVIISSSYQATI 74
Query: 345 DGFVKHLNLTVEESYELIKSAVEFARTARDLYLQEC-QESNLSGRKPLIAGSVGPYGAYL 521
GF+ + +EE+ L++ ++E A ARD + + ++S + L+A S+G YGAYL
Sbjct: 75 PGFLAR-GMLLEEAEGLLRRSIELALEARDEFWKSTLRKSKPVYNRALVAASIGSYGAYL 133
Query: 522 HDTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEALVEILKEYP 701
D SEY+G+Y ++ T E +K++HR R+Q L AG D++AFE IP + EA+ALVE+L+E
Sbjct: 134 ADGSEYSGSYGEDITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNKMEAQALVELLEEEN 193
Query: 702 -NMKAWLSFS 728
+ +W+ FS
Sbjct: 194 IQVPSWICFS 203
>01_06_0875 -
32650150-32650350,32650464-32650788,32650872-32651092,
32651187-32651243,32651333-32651515
Length = 328
Score = 139 bits (337), Expect = 2e-33
Identities = 76/176 (43%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Frame = +3
Query: 165 VLDGGFSTQLTCHAGHTADGDPLWSARFLKTHPQDVINTHLDFLRAGSDIIETNTYQASV 344
V+DGG +T+L H D LWSA L + P + HLD+L AG++II + +YQA++
Sbjct: 26 VVDGGLATELEAHGADLHD--ELWSASCLVSAPHLIRKVHLDYLDAGANIITSASYQATI 83
Query: 345 DGFVKHLNLTVEESYELIKSAVEFARTARDLYLQECQES-----NLSGRKP-LIAGSVGP 506
GF L+ E S L++ +V A+ AR ++ + + S R+P L+A S+G
Sbjct: 84 QGFQAR-GLSRERSEALLRRSVHIAQEARAIFAEGWSKGPYANHRSSPRRPVLVAASIGS 142
Query: 507 YGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEA 674
YGAYL D SEYTG+Y + TKET+K++HR R+Q L +AG D++AFETIP + EA+A
Sbjct: 143 YGAYLADGSEYTGDYGISVTKETLKSFHRRRLQVLADAGPDLIAFETIPNKLEAQA 198
>08_01_0343 -
3025577-3025810,3026428-3026505,3026630-3026748,
3027566-3027645,3028034-3028107,3028536-3028620,
3028704-3028789,3028968-3029038,3029126-3029207,
3029490-3029531,3029552-3029584,3029699-3029794,
3030163-3030414,3030970-3031149,3032079-3032119,
3032341-3032470,3032504-3032606,3032686-3032773,
3033151-3033304,3033688-3033739,3033815-3033894,
3034478-3034789,3034886-3034955,3035033-3035100,
3035405-3035678,3036408-3036580,3037036-3037128,
3037228-3037443
Length = 1121
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 454 WHSCKYKSRAVLANSTALFISS*LSSTVKFRCL-TNPS 344
W+ C + V TA + + L S+++FR L TNPS
Sbjct: 808 WYCCMFPQHTVKVRITASWALANLCSSIRFRALDTNPS 845
>01_07_0171 +
41683670-41683872,41684386-41684483,41684614-41684692,
41684845-41685000,41685021-41685146,41686249-41686540,
41686978-41687053,41687295-41687392,41687523-41687665,
41688522-41688579,41689055-41689213,41689291-41689343,
41689978-41690212,41690317-41690403,41690607-41690711
Length = 655
Score = 29.5 bits (63), Expect = 2.9
Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 7/173 (4%)
Frame = +3
Query: 210 HTADGDPLWSARFLKTHPQDVINTHLDFLRAGSDIIETNTYQASVDGFVKHLNLTVEESY 389
H GD +W AR K H + V LDF+ ++ + + D K L ++ Y
Sbjct: 446 HLPVGDGIWIARDRKLHTEYV----LDFIVERKNV--ADLCSSITDNRYKDQKLRLKFCY 499
Query: 390 ELIKSAVEFARTARDLYLQECQESNLSGRKPLIAGSVGPYGAYLHDTSEYTGNY---ADN 560
V + + E E R P A +V YG H +EY + N
Sbjct: 500 LYEIQFVSYYNPISSCFTTEILEGFDVQRTPGYAETVRTYGNLTHSITEYYSTHFSTGAN 559
Query: 561 TTKETIKNWHRTR----IQALVEAGVDILAFETIPCQKEAEALVEILKEYPNM 707
T++ + T+ ++ + + V L +P Q EA + ++ YP +
Sbjct: 560 TSQVCLTYDEFTKKCDDLKKITVSDVFALQLMQVP-QVTEEAALAVIGLYPTL 611
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 570 ETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEALVEILKEYPNMKA 713
ET+KN ++QAL E VD+L +K + L+EI ++ ++A
Sbjct: 16 ETLKN----KLQALAEQHVDVLESLAPVVRKRVDVLIEIQSQHDELEA 59
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 28.3 bits (60), Expect = 6.7
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Frame = +3
Query: 153 KTVFVLDGGFSTQLTCHAGHTADGDP---LWSARFLKTHPQDVINTHLDFLRAGS----D 311
+T+ V+D FS + T H GHT ++ R +T ++N+ LRA
Sbjct: 71 RTLDVMDHLFSCEATWHKGHTLAQTVFTCIYLMRMERTSSHAILNSFCRILRATCYAVVS 130
Query: 312 IIETNTYQASVDGFVKHLNLTV-EESYELIKSAVEFARTARDLYLQECQESNLSGRKPL 485
++ T D F L + +E E S + L+ C+ LS +K L
Sbjct: 131 VVSTARTHEEEDLFTMSFGLPLRDEGDEKCLSILNSVEETIARQLRACKAQALSRKKTL 189
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +3
Query: 429 RDLYLQECQESNLSGRKPLIAGSVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRI 602
++ +LQ+ + L GR+ + + A + TGN T +E WH R+
Sbjct: 388 QEKHLQKQKRRRLQGREDETLAKLQKFKASFLSKNPATGNTEKKTDEEDYTGWHSNRL 445
>12_02_0645 +
21475126-21475293,21475386-21475538,21478101-21478249,
21478449-21478526,21478604-21478697,21478920-21478994,
21479341-21479637,21479722-21479789,21479876-21479930,
21480137-21480275,21480439-21480623,21480748-21481119
Length = 610
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 333 QASVDGFVKHLNLTVEESYELIKSAVEFARTARDL 437
+A ++GF +HL +EE L EF +A+ +
Sbjct: 94 RAQLEGFDRHLEALIEEIPNLTSGCTEFVESAQQI 128
>04_04_0081 + 22601090-22601395,22601714-22602522,22602584-22602611
Length = 380
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 487 MSGFRPERFDSWHSCKYKSRAVLANSTALFISS*LSSTVKFR 362
+ G + R D++ CKY ++ + A S++LFI+ LSS V R
Sbjct: 13 LRGMKSARRDAY--CKYDNQWLTAFSSSLFIAGTLSSLVASR 52
>04_03_0717 -
18999057-18999175,18999267-18999303,18999453-18999668,
19000429-19000551,19000955-19001236,19002666-19002877,
19003481-19003661
Length = 389
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 597 RIQALVEAGVDILAFETIPCQKEAEALVEILKEYPNM 707
R+QA +AG D+L + + +E +A + + P M
Sbjct: 189 RVQAFADAGADVLFIDALASIEEMKAFCAVSPKVPKM 225
>01_05_0590 + 23480381-23481169
Length = 262
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 498 VGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVEAGVDILAFETIPCQKEAEAL 677
+ P+GAY + T + A T + I+ T+I VEA VD + +T K+ + L
Sbjct: 133 ITPFGAYCYITMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDIVVKT----KQKDDL 188
Query: 678 VEILKE 695
+ L+E
Sbjct: 189 ITDLEE 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,396,419
Number of Sequences: 37544
Number of extensions: 384572
Number of successful extensions: 1024
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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