Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22p14
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   1.8  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.2  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   4.2  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   9.8  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 260 PSRCY*HTSGLPSCW 304
           P++CY   +G P CW
Sbjct: 372 PTQCYDEQNGAPQCW 386


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 252 LKIVHSKEDRHQQYDRRDRSTVLRILHPTQRLSLKI 145
           L ++H   D+    + R R+  + I+ PT+ L+++I
Sbjct: 230 LPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQI 265


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = +1

Query: 40  CNYNVSNY--CKKFDRCVAIIYVL 105
           C Y  SN   C   DRC A+IY L
Sbjct: 160 CLYLSSNVLVCVSLDRCFAVIYPL 183


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 486 IAGSVGPYGAYLHDTSEYTGNY 551
           I G +  YG   H T EY G++
Sbjct: 11  ICGYIVQYGCITHCTFEYLGDF 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,862
Number of Sequences: 2352
Number of extensions: 16691
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)