Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22p14
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006685-2|AAK84573.1|  334|Caenorhabditis elegans Hypothetical ...    63   2e-10
Z46828-6|CAA86855.1| 1249|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z78410-2|CAB01636.2|  327|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC006685-2|AAK84573.1|  334|Caenorhabditis elegans Hypothetical
           protein T13G4.4 protein.
          Length = 334

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 10/221 (4%)
 Frame = +3

Query: 102 TINLFFYE--IMSNFEV--SSKTVFVLDGGFSTQLTC--HAGHTADGDPLWSARFLKTHP 263
           T ++ F E  I+ N ++  S + V +LDG  S+QL    +  +  +  P WS  F     
Sbjct: 43  TFSVLFIELCILINLDLFESFRMVRLLDGSMSSQLLRFGYDCNQQENKPHWS--FPANAD 100

Query: 264 QDVI-NTHLDFLRAGSDIIETNTYQASVDGFVKHLNLTVEESYELIKSAVEFARTARDLY 440
            +++ N +  FL     +I +NTY      F   L+ T+ E+ E  K  + + +   +  
Sbjct: 101 MELMENVYKSFLDLEVKVITSNTYH-----FGSTLDKTIPENAE--KREL-YEKYFEETC 152

Query: 441 LQECQESNLSGRKPLIA-GSVGPYGAYLHDTSEYTGNYADNT-TKETIKNWHRTRIQALV 614
           L+ C  +  +G   + A GSVG      HD SEYTG Y D +  K+T  ++ +  +    
Sbjct: 153 LKLCHLT--TGSSDVEAWGSVGTLATMYHDLSEYTGAYMDQSEAKKTAYDYFKIILTLFH 210

Query: 615 E-AGVDILAFETIPCQKEAEALVEILKEYPNMKAWLSFSCK 734
             + +  L FETIP   E    +++L+E+P  +A +SF+ K
Sbjct: 211 NRSSIRKLIFETIPSADEGSVALDVLQEFPEFEAVISFTFK 251


>Z46828-6|CAA86855.1| 1249|Caenorhabditis elegans Hypothetical
           protein R03D7.1 protein.
          Length = 1249

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
 Frame = +3

Query: 255 THPQDVINTHLDFLRAGSDIIETNTYQASVDGFVKHL--NLTVEESYELIKSAVEFARTA 428
           T P  +   H  +L AG+D +ETNT+  +      +   +L  E +Y+   SA+   R  
Sbjct: 61  TRPDIIYKIHKLYLEAGADFVETNTFSGTTIAQADYRCEHLVHEINYQ---SALVARRAC 117

Query: 429 RDLYLQECQESNLSGRKPLIAGSVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQA 608
            D+          +GR+  + G++GP    L  +         N T + +   +  + ++
Sbjct: 118 DDV-------GAATGRRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARS 170

Query: 609 LVEAGVDILAFETIPCQKEAEA 674
           L++ GVD+L  ET+     A+A
Sbjct: 171 LIQGGVDVLLVETVFDSANAKA 192


>Z78410-2|CAB01636.2|  327|Caenorhabditis elegans Hypothetical
           protein C51E3.2 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 581 FYGFLCCIISIITGVF*CVM*ICTIRTYR 495
           F+ F C +I +I  V   +M ICTIRT R
Sbjct: 14  FFFFFCSVIGVIGNV---IMVICTIRTKR 39


>Z83113-10|CAI46598.1|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/87 (22%), Positives = 35/87 (40%)
 Frame = +3

Query: 438 YLQECQESNLSGRKPLIAGSVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVE 617
           Y+ +   S +S     ++ +V   G  LHD  E   NY     K   +  H T+ +A+  
Sbjct: 371 YVNDSATSAVSTVADSVSSAVHTVGEKLHDAEEAASNYMHGAHKSASEAAHDTK-EAVTS 429

Query: 618 AGVDILAFETIPCQKEAEALVEILKEY 698
              ++         + A AL E  +E+
Sbjct: 430 KAAEVENVVKSSLGQRAAALHEKKREF 456


>Z73975-5|CAA98278.2|  556|Caenorhabditis elegans Hypothetical
           protein K08H10.2b protein.
          Length = 556

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/87 (22%), Positives = 35/87 (40%)
 Frame = +3

Query: 438 YLQECQESNLSGRKPLIAGSVGPYGAYLHDTSEYTGNYADNTTKETIKNWHRTRIQALVE 617
           Y+ +   S +S     ++ +V   G  LHD  E   NY     K   +  H T+ +A+  
Sbjct: 371 YVNDSATSAVSTVADSVSSAVHTVGEKLHDAEEAASNYMHGAHKSASEAAHDTK-EAVTS 429

Query: 618 AGVDILAFETIPCQKEAEALVEILKEY 698
              ++         + A AL E  +E+
Sbjct: 430 KAAEVENVVKSSLGQRAAALHEKKREF 456


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,722,136
Number of Sequences: 27780
Number of extensions: 370353
Number of successful extensions: 1129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)