Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22p12
(336 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 26 1.3
SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S... 25 2.3
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 2.3
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 3.1
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 25 4.1
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 25 4.1
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 24 7.1
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 24 7.1
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 24 7.1
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 23 9.4
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 23 9.4
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 26.2 bits (55), Expect = 1.3
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 121 CEKLNS-VQRLPHPSNHNALLTPSPQK*AGWWY 216
C L + V R PH + H L P WWY
Sbjct: 294 CPSLEAKVTRFPHKARHLIWLEPEGLDPNSWWY 326
>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 2.3
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 214 YLPLRTHKLTKRPTTSNYL-NYNFASLIFITRYNSF 318
Y P+R HK T+ + NY+ Y+ +I + + F
Sbjct: 97 YFPIRLHKTTELDSEKNYIFGYHPHGIISLGAFGGF 132
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 2.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 30 FWENFIQLYNKINRGLKLY 86
FWE F+Q Y K + L Y
Sbjct: 64 FWEKFLQTYGKQEKNLLAY 82
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 3.1
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 151 PHPSNHNALLTPS 189
PHPSN A+L+PS
Sbjct: 102 PHPSNQPAMLSPS 114
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 24.6 bits (51), Expect = 4.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 177 TYSFTAEIGRVVVP 218
TY F+AE+G +V P
Sbjct: 198 TYDFSAEVGNIVTP 211
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 24.6 bits (51), Expect = 4.1
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +1
Query: 97 LLVILRLSCEKLNSVQRLPHPSNHNALLTPSPQK*AGWWYLPLRTHKLTKRPTTSNYL-- 270
L++ +L E ++ + + PS+ L+ S ++ A W L T ++ TTS L
Sbjct: 490 LVLSYQLLQELISGINQKQKPSHKRGSLSASHKRDAAWSLLYKATSNKSRPTTTSTELKT 549
Query: 271 --NYNFASLIFITRYNSFTVLK 330
NF + F +LK
Sbjct: 550 DARLNFQRQVLQDFRQRFAILK 571
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 133 NSVQRLPHPSNHNALLTPSPQK*AG 207
+SV ++P P++H+AL P +G
Sbjct: 318 SSVGQIPQPTDHSALSPSKPMSISG 342
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 36 ENFIQLYNKINRGLKLYMHNTPSNTSA 116
ENF Y+ ++ LKL +H +N A
Sbjct: 407 ENFKTFYDAFSKNLKLGIHEDAANRPA 433
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 23.8 bits (49), Expect = 7.1
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 85 TCIILLVILRLSCEKLNSVQRLPHPSNHNALLTPSP 192
TC +L++ L + E + ++ H + L+ P+P
Sbjct: 137 TCNLLIMQLEIPLEAVEIALQIAHKHGVDVLMNPAP 172
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 23.4 bits (48), Expect = 9.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 254 VGRFVSL*VRKGRYHHPAYFCGEGVSN 174
V ++ ++ VR+ + P+YF G VSN
Sbjct: 751 VSKWANVSVRQSDFDAPSYFQGTPVSN 777
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 23.4 bits (48), Expect = 9.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 130 LNSVQRLPHPSNHNALLTPSPQK*AGWWYLPLRTHKLTKRPTTSNYLNYN 279
L+ VQ +PH LL P GW P R T P + N+N
Sbjct: 183 LDRVQEVPHEGPICDLLWSDPDDRPGWGISP-RGAGYTFGPDIAEAFNHN 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,357,000
Number of Sequences: 5004
Number of extensions: 24999
Number of successful extensions: 54
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 95984434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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