Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22p12
(336 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09850-1|AAC50266.1| 626|Homo sapiens zinc finger protein protein. 32 0.38
BC020219-1|AAH20219.1| 626|Homo sapiens ZNF143 protein protein. 32 0.38
AJ295844-2|CAC17610.1| 531|Homo sapiens ZNF143 protein protein. 32 0.38
AF071771-1|AAC96102.1| 551|Homo sapiens SPH-binding factor prot... 32 0.38
Z97832-3|CAI20189.1| 544|Homo sapiens zinc finger protein 76 (e... 30 1.5
M91592-1|AAA98739.1| 515|Homo sapiens zinc-finger protein protein. 30 1.5
BT007316-1|AAP35980.1| 570|Homo sapiens zinc finger protein 76 ... 30 1.5
BC002549-1|AAH02549.1| 570|Homo sapiens zinc finger protein 76 ... 30 1.5
BC000133-1|AAH00133.1| 570|Homo sapiens zinc finger protein 76 ... 30 1.5
DQ926303-1|ABK81521.1| 122|Homo sapiens immunoglobulin heavy ch... 29 3.6
AF035020-1|AAD56256.1| 119|Homo sapiens myosin-reactive immunog... 28 6.2
DQ926040-1|ABI50705.1| 120|Homo sapiens immunoglobulin heavy ch... 28 8.2
>U09850-1|AAC50266.1| 626|Homo sapiens zinc finger protein protein.
Length = 626
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y+GC L T H+L +H R+ G Y C
Sbjct: 229 YDGCGKLYTTAHHLKVHERSHTGDRPYQC 257
>BC020219-1|AAH20219.1| 626|Homo sapiens ZNF143 protein protein.
Length = 626
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y+GC L T H+L +H R+ G Y C
Sbjct: 229 YDGCGKLYTTAHHLKVHERSHTGDRPYQC 257
>AJ295844-2|CAC17610.1| 531|Homo sapiens ZNF143 protein protein.
Length = 531
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y+GC L T H+L +H R+ G Y C
Sbjct: 229 YDGCGKLYTTAHHLKVHERSHTGDRPYQC 257
>AF071771-1|AAC96102.1| 551|Homo sapiens SPH-binding factor
protein.
Length = 551
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y+GC L T H+L +H R+ G Y C
Sbjct: 154 YDGCGKLYTTAHHLKVHERSHTGDRPYQC 182
>Z97832-3|CAI20189.1| 544|Homo sapiens zinc finger protein 76
(expressed in testis) protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y GC L T H+L +H R G Y C
Sbjct: 143 YKGCGRLYTTAHHLKVHERAHTGDRPYRC 171
>M91592-1|AAA98739.1| 515|Homo sapiens zinc-finger protein protein.
Length = 515
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y GC L T H+L +H R G Y C
Sbjct: 169 YKGCGRLYTTAHHLKVHERAHTGDRPYRC 197
>BT007316-1|AAP35980.1| 570|Homo sapiens zinc finger protein 76
(expressed in testis) protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y GC L T H+L +H R G Y C
Sbjct: 169 YKGCGRLYTTAHHLKVHERAHTGDRPYRC 197
>BC002549-1|AAH02549.1| 570|Homo sapiens zinc finger protein 76
(expressed in testis) protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y GC L T H+L +H R G Y C
Sbjct: 169 YKGCGRLYTTAHHLKVHERAHTGDRPYRC 197
>BC000133-1|AAH00133.1| 570|Homo sapiens zinc finger protein 76
(expressed in testis) protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 140 YNGCPTLQTITHYLLLHRRNRQGGGTYPC 226
Y GC L T H+L +H R G Y C
Sbjct: 169 YKGCGRLYTTAHHLKVHERAHTGDRPYRC 197
>DQ926303-1|ABK81521.1| 122|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 122
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -2
Query: 200 YFC--GEGVSNALWFEGWGSRCTLFNFSQL 117
Y+C G+ + ALWF+ WG + TL F QL
Sbjct: 93 YYCARGDAGATALWFDPWG-QGTLVTFLQL 121
>AF035020-1|AAD56256.1| 119|Homo sapiens myosin-reactive
immunoglobulin heavy chain variable region protein.
Length = 119
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 200 YFCGEGVSNALWFEGWG 150
Y+C G LWF+ WG
Sbjct: 94 YYCARGGGRGLWFDPWG 110
>DQ926040-1|ABI50705.1| 120|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 120
Score = 27.9 bits (59), Expect = 8.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -2
Query: 200 YFCGEGVSNALWFEGWG 150
Y+C G+ WF+ WG
Sbjct: 94 YYCARGIMGTWWFDPWG 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,228,788
Number of Sequences: 237096
Number of extensions: 953571
Number of successful extensions: 5890
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5890
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -