Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22p07
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 33 1.1
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 33 1.1
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 33 1.1
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 33 1.1
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 33 1.1
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 33 1.1
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 33 1.1
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 33 1.5
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 33 1.5
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 33 1.5
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 33 1.5
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFR 47
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFR 47
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFR 47
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFR 38
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFR 47
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFR 47
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG H + +KIR S FR
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFR 47
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG HG + +KIR S F+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQ 47
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG HG + +KIR S F+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQ 47
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG HG + +KIR S F+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQ 47
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 668 KALKAQRKVVKGEHGKRVRKIRNSVHFR 751
KALKA++ V+KG HG + +KIR S F+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQ 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,817,821
Number of Sequences: 237096
Number of extensions: 710026
Number of successful extensions: 1687
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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