Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22p02
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0648 + 4689755-4690693                                           31   1.0  
07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588     28   9.7  

>06_01_0648 + 4689755-4690693
          Length = 312

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 682 SKKYIGTGPLLV*TSSSCLISWVAARPYSKQGIPKFA 572
           +K+Y+G  PLL   S S    ++ A P+ ++G+P  A
Sbjct: 44  AKRYLGANPLLAPVSPSSRFLFLDASPFPRRGLPAAA 80


>07_03_0498 + 18786732-18786869,18788048-18788143,18788301-18788588
          Length = 173

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +3

Query: 297 TLIARFSNKPTSSEVLTAYLTQCNEPPWTSYFVKYSYVKDDQFGMSNFN 443
           T + + ++ P  +EVL   +T   +P     F +  +  DD  G++ FN
Sbjct: 50  TSVQKKNSNPVWNEVLQLAVTNPTKPVKLEVFDEDKFTADDSMGVAEFN 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,346,215
Number of Sequences: 37544
Number of extensions: 378650
Number of successful extensions: 645
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)