Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22o23
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1995|AAF50034.2|  962|Drosophila melanogaster CG6071-PA...    30   0.99 
AY094960-1|AAM11313.1|  964|Drosophila melanogaster SD03277p pro...    27   7.0  
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB...    27   7.0  

>AE014296-1995|AAF50034.2|  962|Drosophila melanogaster CG6071-PA
           protein.
          Length = 962

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 26/72 (36%), Positives = 33/72 (45%)
 Frame = -3

Query: 375 NVTMLVHRY*SIAKRMFVFWYTHLINSVKL*SINVRTEVIDDITLIMVTLFTTCTRTILI 196
           NVT+ V  Y S    + V W T L+N  KL SI   T       L M  L     +T L 
Sbjct: 608 NVTLNVISYLSNETSVLV-WETALLNLEKLQSIMRMTTGFRIFKLYMQKLIEPAFKTTLN 666

Query: 195 NTSTKF*TSSQV 160
           + STK  T S++
Sbjct: 667 SLSTKARTGSEI 678


>AY094960-1|AAM11313.1|  964|Drosophila melanogaster SD03277p
           protein.
          Length = 964

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 388 KKIYKRNYVSAQILIYCKTYVCFLVYASNKFCKIVIN 278
           +KIY +N+   Q++I   T+ C      +   K+++N
Sbjct: 127 RKIYSKNFSQLQLVIEVLTHQCGTTEGLDNVAKLIVN 163


>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
            protein.
          Length = 5146

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 388  KKIYKRNYVSAQILIYCKTYVCFLVYASNKFCKIVIN 278
            +KIY +N+   Q++I   T+ C      +   K+++N
Sbjct: 4309 RKIYSKNFSQLQLVIEVLTHQCGTTEGLDNVAKLIVN 4345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,651,107
Number of Sequences: 53049
Number of extensions: 245891
Number of successful extensions: 520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)