Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22o22
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025276-1|AAH25276.2|  556|Homo sapiens UTP18, small subunit (S...    30   7.8  
AF151806-1|AAD34043.1|  521|Homo sapiens CGI-48 protein protein.       30   7.8  

>BC025276-1|AAH25276.2|  556|Homo sapiens UTP18, small subunit (SSU)
           processome component, homolog (yeast) protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 528 DYDTEDEERVNTFNSRKRRVVAKRAFNSKSKKNSYRQ 638
           D + EDEE V+  N+R R+ + K A  SK  K++ ++
Sbjct: 144 DEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKK 180


>AF151806-1|AAD34043.1|  521|Homo sapiens CGI-48 protein protein.
          Length = 521

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 528 DYDTEDEERVNTFNSRKRRVVAKRAFNSKSKKNSYRQ 638
           D + EDEE V+  N+R R+ + K A  SK  K++ ++
Sbjct: 120 DEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKK 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,288,979
Number of Sequences: 237096
Number of extensions: 1247109
Number of successful extensions: 2778
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2778
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)