Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22o17
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 32 0.54
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 31 0.71
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 31 0.71
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 31 0.71
AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical ... 31 0.71
Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical pr... 29 3.8
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 5.0
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 29 5.0
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 29 5.0
AC024812-1|AAF59552.2| 364|Caenorhabditis elegans Hypothetical ... 29 5.0
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 5.0
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 6.7
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical pr... 28 8.8
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 28 8.8
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 434 HSIVPSTDQDLREPIRDHIAELRTELETMRSSITS 538
H ++ +DLRE +R+H+ EL + ET+ +++ S
Sbjct: 198 HVLIEKEVEDLREKVREHLGELSKQSETIGNALHS 232
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform c protein.
Length = 1576
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 488 IAELRTELETMRSSITSQAREHVRADEV 571
I ELR E+ET+R IT +EH +E+
Sbjct: 396 IRELREEVETLRMQITQTKKEHAETEEL 423
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform b protein.
Length = 1610
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 488 IAELRTELETMRSSITSQAREHVRADEV 571
I ELR E+ET+R IT +EH +E+
Sbjct: 396 IRELREEVETLRMQITQTKKEHAETEEL 423
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform a protein.
Length = 1595
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 488 IAELRTELETMRSSITSQAREHVRADEV 571
I ELR E+ET+R IT +EH +E+
Sbjct: 396 IRELREEVETLRMQITQTKKEHAETEEL 423
>AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical
protein Y47H9C.8 protein.
Length = 389
Score = 31.5 bits (68), Expect = 0.71
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +2
Query: 71 APLESLDIELS--EKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISDSNATAREL 244
+P+E L+++L E ++E VG+ +AD K E++ E TL + + + +N + L
Sbjct: 39 SPIEDLELQLEQPEINVEEVGRIIADGIIEKTLDDEKLKELTLKFAKNVPTMANISIWNL 98
Query: 245 CGVLRAAARRISSSLPL--ELVAINMIRRVLRAIRDENRASVDQFQSGEGVGESLQGL 412
L I S L + N+++ + +IR++ + + SLQ +
Sbjct: 99 SEELSTGT--IDSRLVVIGNAFLWNLLKTSMSSIREKFENYKFKIHTMSATSSSLQSI 154
>Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical
protein T02D1.6 protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = -3
Query: 429 AGVARTRPWRLSPT-PSPLWNWSTEALFSSLMALKTLLIMLIATSSSGKLELIRRAAARR 253
A + R R ++ S P P++ W T F ++ LI+++ + L+LI + A +
Sbjct: 221 ANITRVRVFKCSDMMPGPIFYWFTSTTF--ILGYVVPLILIVYFN----LKLINKLYAHK 274
Query: 252 TPQSSRAVALESLIIFSTSVSVASAICSEP 163
A+ + +++++ ++ +C P
Sbjct: 275 RVLPRSAIPVRRVVVYTVLIAAVYFVCWTP 304
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Frame = +2
Query: 95 ELSEKHI---ETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISDSNATARELCGVLRAA 265
E+SEK E G AD + ++Q+ A+LT + +++ + ELC +
Sbjct: 111 EVSEKEDGSEEEAGTSGADEEGKQYKNTDQLVGASLTCIFEVLEQLSRRDAELCVQALES 170
Query: 266 ARRISSSLPLEL------VAINMIRRVLRAIRDENRASV 364
+ S+P++ ++++ + VL+ +R++ SV
Sbjct: 171 LLSLIQSMPIDCLQSENRLSMSAMMHVLKTLREDACPSV 209
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Frame = +2
Query: 26 IFTTLPLFTLHYNIMAPLESLDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVE 205
I TLP + + A L L I SE H V ++R L +I A L
Sbjct: 726 IVCTLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIGVAVLPPEH 785
Query: 206 K------IISDSNATARELCGVLRAAARRISSS 286
K II++ + T+ LC L R I S
Sbjct: 786 KAHVEFAIINNDSPTSEYLCDQLICRLRMIDPS 818
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 6/93 (6%)
Frame = +2
Query: 26 IFTTLPLFTLHYNIMAPLESLDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVE 205
I TLP + + A L L I SE H V ++R L +I A L
Sbjct: 726 IVCTLPFTEVIDELKASLNILKIPFSESHEMVYEPQVTEMRRLSLPSGVEIGVAVLPPEH 785
Query: 206 K------IISDSNATARELCGVLRAAARRISSS 286
K II++ + T+ LC L R I S
Sbjct: 786 KAHVEFAIINNDSPTSEYLCDQLICRLRMIDPS 818
>AC024812-1|AAF59552.2| 364|Caenorhabditis elegans Hypothetical
protein Y54E10BR.4 protein.
Length = 364
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +2
Query: 260 AAARRISSSLPLELVAINMIRRVLRAIRDENRASVDQFQSGEGVGESLQGLVL----ATP 427
+AAR++ ++LP E+ + LRA+ D ++ + D FQS V + L
Sbjct: 44 SAARKLWNTLPFEVTLREPTQTALRAVIDASKTTGD-FQSLSMVDIKMIALTYDLHRQYV 102
Query: 428 ARHSIVPSTDQDLREPIRDHIAELRTELETMRSSITSQAREHVRADE 568
A + + +T+ D ++ I D A + E T+ + E + +E
Sbjct: 103 AENDVAETTEDDEKKNIEDLSA--KVEQVTVGENTEDTKEEEIEENE 147
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Frame = +2
Query: 95 ELSEKHI---ETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISDSNATARELCGVLRAA 265
E+SEK E G AD + ++Q+ A+LT + +++ + ELC +
Sbjct: 111 EVSEKEDGSEEEAGTSGADEEGKQYKNTDQLVGASLTCIFEVLEQLSRRDAELCVQALES 170
Query: 266 ARRISSSLPLEL------VAINMIRRVLRAIRDENRASV 364
+ S+P++ ++++ + VL+ +R++ SV
Sbjct: 171 LLSLIQSMPIDCLQSENRLSMSAMMHVLKTLREDACPSV 209
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 95 ELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEK 208
++ EK I+T+G VAD + SE + + TLVEK
Sbjct: 736 QIFEKEIKTLGIRVADAKRQNDELSELLESKSTTLVEK 773
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 95 ELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEK 208
++ EK I+T+G VAD + SE + + TLVEK
Sbjct: 736 QIFEKEIKTLGIRVADAKRQNDELSELLESKSTTLVEK 773
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 95 ELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEK 208
++ EK I+T+G VAD + SE + + TLVEK
Sbjct: 736 QIFEKEIKTLGIRVADAKRQNDELSELLESKSTTLVEK 773
>Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical
protein F48F7.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 62 NIMAPLESLDIELSEKHI-ETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISDSNATAR 238
N +A LE + ++L +H+ E + V +I NN +G EQ+ + + + + +A +
Sbjct: 208 NNIAMLEEIFLDL--QHLTEAQDEMVTNIDNNVENGLEQVKQGSANVKTAVEYKKSAMRK 265
Query: 239 ELCGVLRAAARRISSSLPLELVAI 310
++C AA I+ L L +VAI
Sbjct: 266 KIC----VAAILITILLILIIVAI 285
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 27.9 bits (59), Expect = 8.8
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 5/216 (2%)
Frame = +2
Query: 62 NIMAPLESLDIELSEKHIETVGKFVADIRNN--KLSGSEQIAEATLTLVEKII-SDSNAT 232
N+ A L L++ LS V + I ++ +L GS+ + + L I+ S +
Sbjct: 681 NVPAALSVLEVILSVNAQRVVSENSGLILSHLARLLGSKTLDQYGFQLAATILPSIEHFE 740
Query: 233 ARELCGVLRAAARRISSSLPLELVAINMIRRVLRAIRDENRASVDQFQSGEGVGESLQGL 412
+ VL RR+ SS + + + ++ I R++ D QS E + + G+
Sbjct: 741 GSAMTFVLNTMFRRVQSSKTPKFMKLFIVFLCRFTIA---RSAQDLVQSCENIQTGMFGM 797
Query: 413 VLATPARHSIVPSTDQDLREPIRDHIAELRTELETMRSSITSQ--AREHVRADEVLLTFG 586
++ + P Q P + IA + + + +T Q + + + EV +
Sbjct: 798 LIEKVVCIDL-PGLKQTTTGPEKRIIA---IGMGNLLADVTQQLVGQYGILSYEVAMLLE 853
Query: 587 ASALVERFLRPTQNRNCKVVVAEGTDVGEFCLQSHA 694
A++ +R + + + AEG V FC S+A
Sbjct: 854 AASASDRAVLSPEEEQASMYNAEGEFVNPFCRLSYA 889
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539,884
Number of Sequences: 27780
Number of extensions: 318757
Number of successful extensions: 1038
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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