Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc22o17
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.9  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 568 LVRPHV--LPGLTRYGRPHCLQLGTELCDVISY 476
           L +PH+  L GL   GRP  LQL ++   +I Y
Sbjct: 310 LYQPHLRGLNGLEFAGRPQNLQLQSQRNQLIQY 342


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 452 TDQDLREPIRDHIAELRTELETMRSSI 532
           +D+DLRE I +    +R + E  RS +
Sbjct: 313 SDEDLREAIDEFKTPMRNDSERNRSPV 339


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 541 LTRYGRPHCLQ 509
           + RYG+PHC +
Sbjct: 588 VVRYGKPHCAE 598


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 541 LTRYGRPHCLQ 509
           + RYG+PHC +
Sbjct: 626 VVRYGKPHCAE 636


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 371 FQSGEGVGESLQGL 412
           F+ G+G+G+ LQG+
Sbjct: 171 FEPGKGLGKQLQGI 184


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 381 PLWNWSTEALFSSL 340
           P WNWS + +  S+
Sbjct: 838 PYWNWSNQDVIKSI 851


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 470 EPIRDHIAELRTELETMRSSITS 538
           E ++  I  LRT++ +  SSI+S
Sbjct: 358 EKLKQDILNLRTDISSSSSSISS 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,433
Number of Sequences: 438
Number of extensions: 3963
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)