Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22o11
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 41 9e-04
07_03_1107 - 24024387-24024497,24025799-24026410 36 0.025
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 36 0.025
03_06_0316 + 33091194-33091370,33091451-33092155 31 0.70
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 30 1.6
10_08_0897 - 21419639-21420633,21420826-21421153 30 1.6
12_02_0874 + 23915303-23915543,23915630-23915713,23915797-239163... 30 2.2
12_01_0116 - 884400-884783,887864-888031,888285-888479,888668-88... 30 2.2
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 30 2.2
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608 30 2.2
12_01_0877 - 8415186-8415272,8415696-8416310 29 2.8
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 29 2.8
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 29 3.8
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 29 3.8
10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175 29 5.0
06_02_0162 + 12466027-12466354,12466894-12467546 29 5.0
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231... 29 5.0
12_01_0613 + 5060150-5060320,5062255-5062359,5064057-5064143,506... 28 6.6
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 28 6.6
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 28 8.7
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 41.1 bits (92), Expect = 9e-04
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 372 KQESAQAELSNPKLTQTDNSKAEVP-KTEAPKTEALKPEAPIPEACKSEAPKSEESKIET 548
K E+A E + + KAE P K E PK E A PEA +E PK+E S E
Sbjct: 121 KVEAAVEETKAEETKAEEEPKAEEPAKEEEPKAEVAAAAAAPPEA-GTEEPKAEASSEEA 179
Query: 549 RGSKP--ESAADKP 584
+ +P E+AAD+P
Sbjct: 180 KTEEPKAEAAADEP 193
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 372 KQESAQAELSNPKLTQTDNSKAEVP----KTEAPKTEALKPEAPIPEACKSEAPKSEESK 539
K E A A + P+ T+ KAE KTE PK EA E P E K+EA +EE+K
Sbjct: 152 KAEVAAAAAAPPE-AGTEEPKAEASSEEAKTEEPKAEAAADE-PAKEESKAEAAPAEEAK 209
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 36.3 bits (80), Expect = 0.025
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +3
Query: 450 TEAPKTEALKPEAPIPEACKSEAPKSEESKIETR-GSKPESAADKPQXXXXXXXXXXXXX 626
T+AP T++ K AP P+A K+ P + +E S P AA+ P
Sbjct: 84 TKAPPTKSTKAPAPAPKAAKATPPPASSPPVEAPVASPPSPAAEAPATIPTKPDAPAPAP 143
Query: 627 XRKKTRSRKPKFTAVETDIKYSKAPSSEP 713
+KK S K K SKAP+ P
Sbjct: 144 AKKKKPSPPSK-----KKKKSSKAPAPAP 167
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 444 PKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRGSKPESAA 575
P EAP T KP+AP P K + P S SK + + SK + A
Sbjct: 124 PAAEAPATIPTKPDAPAPAPAKKKKP-SPPSKKKKKSSKAPAPA 166
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +3
Query: 369 EKQESAQAELSN-PKL---TQTDNSKAEVPKTEAPKTE--ALKPEAPIPEACKSEAPKSE 530
E+ ++A+A + PK + + + E PKTE PKTE A + E A +E PK+E
Sbjct: 126 EEPKAAEAPAAEEPKAEAEAEAEAAATEEPKTEEPKTEEPAKEEEPKAAAAAAAEEPKAE 185
Query: 531 ESKIETRGSKPES 569
+ E + ++PE+
Sbjct: 186 AAAEEAKPAEPET 198
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 31.5 bits (68), Expect = 0.70
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Frame = +3
Query: 444 PKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETR---GSKPESAADKPQXXXXXXXXX 614
PK A A KP+A P K+ A +K + +KP+S A
Sbjct: 146 PKAAAKPKAAAKPKAKAPAKSKAAAKPKAAAKPAAKPKAAAKPKSPAKPAAKPKAAPKAK 205
Query: 615 XXXXXRKKTRSR-KPKFTAVETDIKYSKAPSSEPA 716
+ K ++ KPK AV T K + AP+ PA
Sbjct: 206 AKPAAKPKAKAAPKPKAAAV-TKTKATSAPARRPA 239
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 393 ELSNPKLTQTDNSKA-EVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIE 545
ELS K + + S A E P+T+ K E +K E P E K + SEE + E
Sbjct: 288 ELSRIKKQKKEKSLAIETPRTQEIKIEQIKSEEPREEIQKLDKVLSEEEQWE 339
>10_08_0897 - 21419639-21420633,21420826-21421153
Length = 440
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 393 ELSNPKLTQTDNSKA-EVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIE 545
ELS K + + S A E P+T+ K E +K E P E K + SEE + E
Sbjct: 288 ELSRIKKQKKEKSLAIETPRTQEIKIEQIKSEEPREEIQKLDKVLSEEEQWE 339
>12_02_0874 +
23915303-23915543,23915630-23915713,23915797-23916312,
23916426-23916482,23916630-23916802,23916886-23917014,
23917102-23917296,23917381-23917503,23918171-23918284
Length = 543
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 423 DNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRGSK 560
D +K + P +A E+ KP+ P PE+C K +E+K G K
Sbjct: 157 DANKMDRPN-QADIQESEKPKIPSPESCDVSDVKVDETKTRNEGIK 201
>12_01_0116 -
884400-884783,887864-888031,888285-888479,888668-888793,
888900-889082,889633-889755
Length = 392
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 477 KPEAPIPEACKSEAPKSEESK 539
+PE+PI +C+S +PKS SK
Sbjct: 351 RPESPILSSCESSSPKSSNSK 371
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 393 ELSNPKLTQTDNSKA-EVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIE 545
ELS K + + S E+P+T+ K E +K E P E K + SEE + E
Sbjct: 140 ELSRIKKQKKEKSLVIEIPRTQEIKIEQIKSEEPREEIQKLDKVLSEEEQWE 191
>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
Length = 325
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 447 KTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRGSKP 563
K EAP A P P P+ K PKS E+ R +KP
Sbjct: 195 KAEAPVAPAAAPPPPPPQPKKKAPPKSSEAS-RDRDNKP 232
>12_01_0877 - 8415186-8415272,8415696-8416310
Length = 233
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 405 PKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRGSKPESAADKP 584
P+ TD+ +A +PK E PK + EA PE P E + + P +KP
Sbjct: 143 PRTEITDDIEATLPKKEEPKPPSPPREAE-PEPEPPLPPPEEPTPLVRNEPSPAPTPEKP 201
Query: 585 Q 587
+
Sbjct: 202 E 202
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 366 TEKQESAQAELSNPKLTQTDNSKAEVPKTEAP-KTEALKPEAPIPE 500
T K+ +AE + PKL + + KAE PK P KT +P+ P E
Sbjct: 165 TPKETPPKAEETKPKLEEK-SPKAEPPKMPLPPKTSPTEPQLPPKE 209
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 393 ELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESK 539
E + P L + +SK PK + P APIPE + + KSE+ K
Sbjct: 1206 EKTFPVLQSSQSSKPSKPKVVGNSSSKDTPGAPIPE--REDVEKSEKEK 1252
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 369 EKQESAQAELSNPKLTQTDNSKA--EVPKTEAPKTEALKPEA 488
EK +S+++E + T+T + A E ++E KT+ L+PEA
Sbjct: 857 EKTDSSESESKEAESTETSSESAAPEESQSEPQKTDDLEPEA 898
>10_07_0178 - 13856391-13856458,13857231-13858211,13858848-13859175
Length = 458
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 393 ELSNPKLTQTDNSKA-EVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIE 545
ELS K + + S E P+T+ K E +K E P E K + SEE + E
Sbjct: 140 ELSRIKKQKKEKSLVIETPRTQEIKIEQIKSEEPREEIQKLDKVLSEEEQWE 191
>06_02_0162 + 12466027-12466354,12466894-12467546
Length = 326
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 393 ELSNPKLTQTDNSKA-EVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIE 545
ELS K + + S A E P+T+ K E +K + P E K + SEE + E
Sbjct: 172 ELSRIKKQKKEKSLAIETPRTQEIKIEQIKSKEPREEIQKFDKVLSEEEQWE 223
>01_06_0359 +
28722524-28722613,28722794-28722863,28723062-28723159,
28724029-28724167,28724243-28724370,28724500-28724592,
28724707-28724757,28725405-28725470,28725568-28725633,
28725900-28725977,28726248-28726427,28726502-28726577,
28726660-28726823,28727569-28727931
Length = 553
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 366 TEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPE 500
T K E ++ E+ P + + + E P P TE + P P PE
Sbjct: 302 TYKPEESE-EIPEPVSAEEEKPQIEEPAVAVPSTEVVPPPPPKPE 345
>12_01_0613 +
5060150-5060320,5062255-5062359,5064057-5064143,
5064265-5064318,5064402-5064547,5064651-5064804,
5064891-5065028,5065454-5065527,5065615-5065756,
5066396-5066474,5067326-5067423
Length = 415
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 381 SAQAELSNPKLTQ--TDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRG 554
++QA L +L + + NS P+T + ++ P P+ +S SE S I G
Sbjct: 137 ASQALLPREQLEKLFSSNSVQSQPQTSSFSAGTVRCAIPDPDVPQSCVNSSEPS-ISLPG 195
Query: 555 SKPESAAD 578
+KP+SA+D
Sbjct: 196 TKPKSASD 203
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 366 TEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKI 542
T Q+ + K + + A P P+ E +PE P PE K EAPK E + +
Sbjct: 294 TVAQKDKVLAIEYKKEAEEEEKPASPPPAPEPEPEQ-EPE-PEPEPVKEEAPKEEPTDL 350
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 375 QESAQAELSNPKLTQTDNSKAEVPKTEAPKTE 470
+ AQ E + PK+ +T+ S+ PK APKTE
Sbjct: 1722 EPKAQPEPAEPKVKETEPSRTPEPK--APKTE 1751
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,646,278
Number of Sequences: 37544
Number of extensions: 181082
Number of successful extensions: 707
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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