Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22n10
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816... 33 0.18
11_01_0566 + 4466318-4466695,4466736-4466909,4466941-4467038,446... 33 0.24
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 33 0.32
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 32 0.43
01_06_1202 + 35396165-35396260,35396398-35396549,35396694-353969... 31 0.98
11_01_0051 + 391254-391343,391460-391862,392345-392352,393627-39... 31 1.3
12_02_0702 - 22278513-22278751,22279054-22279889,22279932-222799... 30 1.7
12_01_0052 + 433203-433292,433409-433815,434435-434447,437081-43... 30 1.7
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 30 1.7
02_04_0175 + 20642877-20643618,20643844-20643955,20644052-206441... 30 1.7
01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388... 30 2.3
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 3.0
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 29 4.0
03_01_0574 + 4243019-4244284 29 4.0
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 29 5.2
07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818... 29 5.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 24 5.8
06_01_0379 - 2723365-2723490,2724558-2724647,2724813-2725046,272... 28 6.9
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641... 28 9.2
07_01_0474 + 3579653-3579821,3580407-3580744 28 9.2
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 9.2
03_06_0400 + 33673429-33673560,33674611-33674788,33674933-336751... 28 9.2
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 28 9.2
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 23 9.6
>03_01_0007 +
79202-79433,80426-80713,80790-80870,81090-81191,
81677-81813
Length = 279
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 631 AATRGSSNSLDRLNGPCPATPPPPRSLSATPVASQQN 741
AA+ +S S DRLN P PA PPPP P +S +
Sbjct: 11 AASSSASASADRLNSPTPA-PPPPAPPPPAPKSSSSS 46
>11_01_0566 +
4466318-4466695,4466736-4466909,4466941-4467038,
4467211-4467346
Length = 261
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 574 LKEAKRIKNTQAPDTNTFIAATRGSSNSLDRLNGPCPATPPPPRSLSATPVASQQN 741
L++ I+ ++ T IAA + +S L + P P PPPP + + S +
Sbjct: 29 LEKLDEIEANRSKATEETIAANKATSTILKAASSPTPMAPPPPTPTKCSTICSSSD 84
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +1
Query: 112 VKMLADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDH 291
V DG + GS + T+ DLN + + + +L L S G+ K+W
Sbjct: 121 VSFSPDGRCLASGSGDTTVRFWDLNTQTPLFTCKGGSLNSCILVLISSVGQSCHKNWVLC 180
Query: 292 ALWWPTRNKWLSRPK 336
W P N +S K
Sbjct: 181 IAWSPDGNHLVSGSK 195
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 553 LKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRLNGPCPATPPPP 702
L QN+Q L+E + ++ + +T IAA R ++ L + P PPPP
Sbjct: 76 LNQNFQKLEEIEARRSKASEET---IAAIRATTAILKAASSSTPMAPPPP 122
>01_06_1202 +
35396165-35396260,35396398-35396549,35396694-35396938,
35397044-35398350
Length = 599
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +1
Query: 136 IVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRN 315
+V +N+TI+ + + RT G + +K S+ F + + LWW +
Sbjct: 71 VVNHAQYNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHS 130
Query: 316 KWL 324
WL
Sbjct: 131 SWL 133
>11_01_0051 +
391254-391343,391460-391862,392345-392352,393627-393704,
395371-395763
Length = 323
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/63 (20%), Positives = 29/63 (46%)
Frame = +1
Query: 136 IVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRN 315
++ G +N+T++ + + RT G ++ ++ +S+ F + LWW +
Sbjct: 69 LINRGRYNMTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHS 128
Query: 316 KWL 324
WL
Sbjct: 129 SWL 131
>12_02_0702 -
22278513-22278751,22279054-22279889,22279932-22279975,
22280350-22280463
Length = 410
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 568 QNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRLNGPCPATPPPP 702
Q L++ + I+ ++ T IAA R ++ L + P P PPPP
Sbjct: 110 QILQKLEEIEACRSKATEVTIAAIRTTTAILKASSSPTPMAPPPP 154
>12_01_0052 +
433203-433292,433409-433815,434435-434447,437081-437473
Length = 300
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/63 (20%), Positives = 29/63 (46%)
Frame = +1
Query: 136 IVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWWPTRN 315
++ G +N+T++ + + RT G ++ ++ +S+ F + LWW +
Sbjct: 69 LINRGRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHS 128
Query: 316 KWL 324
WL
Sbjct: 129 SWL 131
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 592 IKNTQAPDTNTFIAATRGSSNSLDRLNGPCPATPPPPRSLSATP---VASQQNGT 747
+K + D+ A+ + S L + + P P PPP ++++ P +A++ NGT
Sbjct: 256 VKKQMSKDSKKESASEKNSPPKLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGT 310
>02_04_0175 +
20642877-20643618,20643844-20643955,20644052-20644174,
20644258-20644509,20644510-20644639,20644719-20644928,
20645280-20645426
Length = 571
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/81 (29%), Positives = 31/81 (38%)
Frame = +1
Query: 505 RHSEELSLCYPLEASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRLNGPCP 684
R S L S +N Q +K K I+ A T AA + L P P
Sbjct: 50 RRGPNTSPVQQLPVSAPPKNPQKVKAPKDIQEVPAQAT----AAAAAKTPLAQVLQMPAP 105
Query: 685 ATPPPPRSLSATPVASQQNGT 747
PPPP + +A P + Q T
Sbjct: 106 PPPPPPMAAAAPPPETVQIAT 126
>01_06_0572 -
30337572-30338107,30338209-30338422,30338505-30338862,
30338948-30339048,30339185-30339749,30340553-30340664,
30341196-30341372,30341589-30341686,30341859-30341953,
30342078-30342158
Length = 778
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 676 PCPATPPPPRSLSATPVA 729
PCPATPPPP L+ +A
Sbjct: 665 PCPATPPPPYQLNHPSLA 682
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 310 RNKWLSRPKHT-LDQYGVHADAALHFTPMHKPLRIQLPDL 426
R + +S+P +T + Q+ H AL F P HK R+ DL
Sbjct: 1543 RMQAMSKPTYTAITQHAKHGKPALVFVPTHKHARLTAVDL 1582
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 595 KNTQAPDTNTFIAATRGSSNSLDRLNGPC-PATPPP-PRSLSATPVASQQNGTL 750
K T P+ ++ T +S++L + P P T PP PR L +P ++QNGT+
Sbjct: 187 KQTGTPEMDS---VTEEASDALTIRSDPITPITNPPLPRCLMNSPCDTEQNGTI 237
>03_01_0574 + 4243019-4244284
Length = 421
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 112 VKMLADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGV 234
V L DG+ + SWN VT+L EK+T + GD + G+
Sbjct: 162 VVRLEDGDYLELVSWNPNWAVTEL-EKKTAALTGDANANGI 201
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 640 RGSSNSLDRLNGPCPATPPPPRSLSATP 723
R SS LDR + P P PPPP A+P
Sbjct: 236 RTSSLYLDRRSPPLPPRPPPPPVRVASP 263
>07_03_1783 +
29480987-29481165,29481526-29481685,29481767-29481862,
29481948-29482062,29482175-29482337,29482536-29482707,
29483924-29484013,29484137-29484598,29484675-29485268,
29485486-29485554,29485810-29485902,29486432-29486677,
29487277-29487417,29487748-29487828,29487911-29487973,
29488059-29488166,29488303-29488383,29488474-29488521,
29488979-29489053,29489973-29490068,29490156-29490236,
29490295-29490402,29490989-29491033,29491119-29491202,
29491379-29491482,29491581-29491728
Length = 1233
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 499 GIRHSEELSLCYPLEASHLKQNYQNLKEAKRIKNTQAPDT--NTFIAATRGSSNSLDRLN 672
G S LS C+PL S LK+ QN +E +AP T + + + G + ++ +
Sbjct: 460 GAPSSSLLSACFPLLESLLKRINQNDREV-----DEAPQTIDSAVVPSAAGETAAIPAIP 514
Query: 673 GPCPATPPPPRSLSATPVAS 732
GP P + +++ + S
Sbjct: 515 GPTSRNVPMEENSNSSSIPS 534
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 589 RIKNTQAPDTNTFIAATRGSSNSLDRLNGPCPATPPPP 702
R PDT T S + N P P PPPP
Sbjct: 323 RFSTGSTPDTKQ---VTSPSPRPVQPSNAPPPPPPPPP 357
Score = 23.0 bits (47), Expect(2) = 5.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 676 PCPATPPPPRSLSATP 723
P P PPPP L+ P
Sbjct: 356 PPPPPPPPPPKLNTAP 371
>06_01_0379 -
2723365-2723490,2724558-2724647,2724813-2725046,
2725174-2725470
Length = 248
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -3
Query: 707 DLGGGGVAGHGP--FNLSKLFE 648
D GGGGVAGH P NLS ++
Sbjct: 88 DSGGGGVAGHDPGSMNLSATYD 109
>08_01_0722 +
6412654-6412860,6413142-6413687,6413745-6413877,
6413917-6414035,6414128-6414883,6415209-6415258,
6415560-6416679
Length = 976
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 118 FSLVRLIKLINYKCHYRARIASLNFFEITSTTATI 14
F++VR IK+ KC R + S+ FF T+ I
Sbjct: 822 FAIVRKIKIAPVKCMIRQWLESIKFFSPVECTSLI 856
>07_01_0474 + 3579653-3579821,3580407-3580744
Length = 168
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 670 NGPCPATPPPPRSLSAT 720
N P PA+PPPP S S++
Sbjct: 127 NAPAPASPPPPPSSSSS 143
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 676 PCPATPPPPRSLSATPVASQQN 741
P PA+P P RS SAT V + Q+
Sbjct: 91 PAPASPAPRRSASATAVLAAQD 112
>03_06_0400 +
33673429-33673560,33674611-33674788,33674933-33675100,
33675207-33675382,33675508-33675666,33676093-33676230,
33676294-33676355,33676509-33676644,33677174-33677268,
33677520-33677635,33677716-33677845,33677938-33677992,
33678065-33678205
Length = 561
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 133 EIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALWW 303
E++ S + Y+ N+ V G + ++LK +E GK + DW+ + L W
Sbjct: 166 EVIAGPSHGINHYMQSGNKSMLPVTLGRVPPSHLVLKDSEVSGKHAQIDWNANKLKW 222
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 139 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVML--KLTESFGKEFKKDWS 285
+G G+++++I D + GD H+GG ++ E F K KK +S
Sbjct: 229 LGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKYS 279
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 682 PATPPPPRSLSATPVA 729
P PPPP S SA VA
Sbjct: 906 PPPPPPPPSASALAVA 921
Score = 22.6 bits (46), Expect(2) = 9.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 655 SLDRLNGPCPATPPPP 702
SL RL G C A P PP
Sbjct: 854 SLMRLGGGCGAAPFPP 869
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,798,018
Number of Sequences: 37544
Number of extensions: 414590
Number of successful extensions: 2421
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2383
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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