Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22n06
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 38 0.008
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 38 0.008
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 38 0.008
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 33 0.17
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 33 0.17
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 33 0.17
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 33 0.29
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 31 1.2
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 30 2.0
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 30 2.0
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 30 2.0
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 6.2
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 28 8.2
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 157 KLPPHQEPNMIVDIVIP---SLLIAALFIGNAFI-VLIIYKYRKRRDGCQSRRERLFTGG 324
K+ P + +VD+V+P L L +G + +LI+ YR R+ G + + LF GG
Sbjct: 1420 KIWPLKAKKNMVDLVVPPNHELCFQKLTVGKIYAGLLILENYRARKSGTEVGGQGLFGGG 1479
Query: 325 HRQRNKTAAPPRTQHDSRHRHP 390
R A +QH S P
Sbjct: 1480 LRSLVAAAKAAESQHSSHTPQP 1501
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 157 KLPPHQEPNMIVDIVIP---SLLIAALFIGNAFI-VLIIYKYRKRRDGCQSRRERLFTGG 324
K+ P + +VD+V+P L L +G + +LI+ YR R+ G + + LF GG
Sbjct: 1539 KIWPLKAKKNMVDLVVPPNHELCFQKLTVGKIYAGLLILENYRARKSGTEVGGQGLFGGG 1598
Query: 325 HRQRNKTAAPPRTQHDSRHRHP 390
R A +QH S P
Sbjct: 1599 LRSLVAAAKAAESQHSSHTPQP 1620
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 157 KLPPHQEPNMIVDIVIP---SLLIAALFIGNAFI-VLIIYKYRKRRDGCQSRRERLFTGG 324
K+ P + +VD+V+P L L +G + +LI+ YR R+ G + + LF GG
Sbjct: 1539 KIWPLKAKKNMVDLVVPPNHELCFQKLTVGKIYAGLLILENYRARKSGTEVGGQGLFGGG 1598
Query: 325 HRQRNKTAAPPRTQHDSRHRHP 390
R A +QH S P
Sbjct: 1599 LRSLVAAAKAAESQHSSHTPQP 1620
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 72 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 206
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 280 RDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 390
R G + RRER T H +RN AP + HDS H+HP
Sbjct: 272 RGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 72 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 206
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 280 RDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 390
R G + RRER T H +RN AP + HDS H+HP
Sbjct: 272 RGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 72 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 206
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 280 RDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 390
R G + RRER T H +RN AP + HDS H+HP
Sbjct: 272 RGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 72 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 206
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 280 RDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 390
R G + RRER T H +RN AP + HDS H+HP
Sbjct: 272 RGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 319 GGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHH 498
G H R PPR + R+RH G H+ + HH Q+ +R+ R +H
Sbjct: 67 GQHHNRGHHHGPPRNHNQDRNRH--RNHDGNRHQNQDRSRHH--NQDRNRRQNHDRNRHQ 122
Query: 499 SIKRERAQ 522
S R R Q
Sbjct: 123 SQGRNRQQ 130
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 319 GGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHH 498
G H R PPR + R+RH G H+ + HH Q+ +R+ R +H
Sbjct: 911 GQHHNRGHHHGPPRNHNQDRNRH--RNHDGNRHQNQDRSRHH--NQDRNRRQNHDRNRHQ 966
Query: 499 SIKRERAQ 522
S R R Q
Sbjct: 967 SQGRNRQQ 974
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 464 KNDDLEDEFNTIPLNGNVHSAGYAV*SPAHQISLR-ESQIN 583
K+D+LEDE NTI L +HS P ++S R +SQ+N
Sbjct: 227 KHDELEDELNTIALE-ELHSTTRDTSPPRTRLSTRAQSQLN 266
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +3
Query: 138 GHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETPRRLSKPSGTTLH 317
G ++ K +H H H A+ S PVH R + TP+R S ++
Sbjct: 77 GFYRKQKPIPKSHPKHQEHHHHAKASVSTPVHSSSTSRNSS--VAPTPQRTVSTSSSSSS 134
Query: 318 GRASAK 335
SA+
Sbjct: 135 AATSAR 140
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +3
Query: 138 GHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETPRRLSKPSGTTLH 317
G ++ K +H H H A+ S PVH R + TP+R S ++
Sbjct: 848 GFYRKQKPIPKSHPKHQEHHHHAKASVSTPVHSSSTSRNSS--VAPTPQRTVSTSSSSSS 905
Query: 318 GRASAK 335
SA+
Sbjct: 906 AATSAR 911
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +3
Query: 138 GHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETPRRLSKPSGTTLH 317
G ++ K +H H H A+ S PVH R + TP+R S ++
Sbjct: 845 GFYRKQKPIPKSHPKHQEHHHHAKASVSTPVHSSSTSRNSS--VAPTPQRTVSTSSSSSS 902
Query: 318 GRASAK 335
SA+
Sbjct: 903 AATSAR 908
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +3
Query: 144 RQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETPRRLSKPSGTTLHGR 323
R RN +AP + + P A S K R +++TP R + S T GR
Sbjct: 12 RSRNAVSAPSSEKKTKMSKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSAT--RGR 69
Query: 324 ASAKKQNCRPTKNP 365
++K P+K P
Sbjct: 70 TASKTPK-TPSKTP 82
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +2
Query: 269 TGNAETVVKAVGNDSSREGIGKETKLPPHQEPNMIVD---IVIPSLLI-AALFIGNAFIV 436
TGN + GN + +G + + + D +VIP +LI AL IG IV
Sbjct: 828 TGNGTSSGGPSGNTGTGPTVGVTAAVVGSSTVSTVSDELSVVIPVVLILVALVIGG--IV 885
Query: 437 LIIYKYR--KRKNDDLEDE 487
I Y+ R KRK ++ E+E
Sbjct: 886 FIWYRKREEKRKEEEAEEE 904
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 141 HRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVH 248
H Q+ QH HR P + GP H++ +H
Sbjct: 411 HLQKFAKQQAESGQHIHHHRQPTPPNGGPQHQQHLH 446
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 325 HRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVH 432
H Q+ QH HR P + GP H++ +H
Sbjct: 411 HLQKFAKQQAESGQHIHHHRQPTPPNGGPQHQQHLH 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,941,250
Number of Sequences: 27780
Number of extensions: 346896
Number of successful extensions: 1032
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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