Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22m15
(747 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.08c |||HRD ubiquitin ligase complex subunit |Schizosacc... 31 0.17
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 29 0.53
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 29 0.70
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 27 2.8
SPAC22E12.06c |gmh3||alpha-1,2-galactosyltransferase Gmh3|Schizo... 27 2.8
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 27 2.8
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 27 2.8
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 3.8
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 3.8
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 26 5.0
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 5.0
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 26 6.6
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 6.6
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 25 8.7
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 25 8.7
SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom... 25 8.7
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 8.7
>SPBC28F2.08c |||HRD ubiquitin ligase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 713
Score = 31.1 bits (67), Expect = 0.17
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 503 VGNTPSVVDYSDISPILEDIETEPQNISQAQIFGIYDFVDNNNCKRSCISQTLFVTALLL 682
V TP D + S L TE S I YD++D + +C++ + V L+L
Sbjct: 631 VDRTPQQPDPQETSESLPSPNTEEMGESYNDIRFTYDYIDGRFLETACVTLIVVVVGLVL 690
Query: 683 L 685
+
Sbjct: 691 M 691
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 29.5 bits (63), Expect = 0.53
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 644 TISYNYYYQRNRKFRISELVRCSVAPFRCLLI 549
++ Y YY R RI L+ C++ F C+ +
Sbjct: 247 SLCYQLYYPRTAHVRIHYLIECALGTFGCIFL 278
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 29.1 bits (62), Expect = 0.70
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 172 VYLERRYVRYSCQFV*NVSHSQFVFSSESVVTEIRCP 62
VY++ RYV + C F+ N +S+S+ E+RCP
Sbjct: 2 VYIKCRYVCFCCAFISNT-------TSKSIFNELRCP 31
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 431 LVASRNR-----FGWSKLSAVLHFATEPGVGNTPSVVDYSDISP 547
LVA NR F W+ S V F GVGNT + Y+D P
Sbjct: 838 LVAGNNRTDESVFAWANKSKVSSFTVSMGVGNTEAKA-YTDGIP 880
>SPAC22E12.06c |gmh3||alpha-1,2-galactosyltransferase
Gmh3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +2
Query: 377 HNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFA 490
H + + G+ P T+ + + GW + V+HFA
Sbjct: 275 HPEIAAIIGILPQTLINSYPVGQPEMGWKEGHLVIHFA 312
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 548 ILEDIETEPQNISQAQIFGIYDFVDNNNCKRSCISQTLFVTALLLLYFKL-CGXXXXXXX 724
I+ T + + A I G+Y+ V N+C +C+ Q+L LL KL C
Sbjct: 32 IVTSPSTGKRLVKNASIKGLYN-VSGNDCFLNCVLQSLASQESLLEILKLRCSSSTLYAT 90
Query: 725 LFRL 736
L+ L
Sbjct: 91 LYEL 94
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 530 YSDISPILEDIETEPQNISQAQIFGIYDFV-DNNNCKRSCISQTLFV 667
Y +S IL D + Q + + +YD + DNN ++ IS T V
Sbjct: 318 YKVLSEILRDDMLKKQRFDENKYLSLYDLIHDNNLFTKASISTTSLV 364
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 191 SPTGFTLVWEVDSYSTIIEY 250
S GFT +W D+ STI++Y
Sbjct: 422 SEDGFTRLWSKDTKSTIVKY 441
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 98 ENKLGMADVSYKLTGVPNIASFKVDPALNKASPTGFTLVWEVDSYSTIIE 247
EN G+ D+S+ G+ ASFK G L+W+ S+ ++E
Sbjct: 228 ENHSGVTDISWSSNGMYIAASFK----------KGGILIWDTQSHEVVVE 267
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 26.2 bits (55), Expect = 5.0
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = -1
Query: 696 NLKYNNNNAVTNKVCEIHDLLQLLLSTKS*-IPNI*ACEMFCGSVSMSSNIGEMSL*STT 520
N+ +N +TN ++D+ LS + + I +++ + + T
Sbjct: 171 NITTPYSNRITNSNTSVNDITSKYLSVGTITLTTISGSDLYTSTFPANGTTS-----GTV 225
Query: 519 EGVLPTPGSVAKCKTADSLLQPNLFLDATRAS*TVEGVSP 400
E V+PT G+V + + S L + F S TVE V P
Sbjct: 226 EVVIPTAGTVTETAVSGSELYTSTFPANGTTSGTVEVVIP 265
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 525 TTEGVLPTPGSVAKCKTADSLLQPNLFLDATRAS*TVEGVSP 400
T E V+PT G+V + + + S L + F S TVE V P
Sbjct: 364 TVEVVIPTAGTVTETEISGSELYTSTFPANGTTSGTVEVVIP 405
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 517 GSVANSRFGGEMQNSRQLTPTKPV 446
GSV+NS+ G + S L P +PV
Sbjct: 424 GSVSNSQPSGNLSESTNLQPVQPV 447
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 107 LGMADVSYKLTGVPNIASFKVDPALNKASP 196
L A ++ ++ V ++ASF++DP LN P
Sbjct: 381 LAKATLAQPVSTVVSVASFELDPRLNITQP 410
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 71 DLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDP 175
D+ TF +NK L G+ N + F++DP
Sbjct: 528 DVPLVTFTPDNKFAQMTAEQTLIGLSNNSIFRIDP 562
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 143 VPNIASFKVDPALNKASPTGFTLVWEVDSYSTIIEYYLWIRQYY 274
+P S NKA T + + V S+ +IEY+ + YY
Sbjct: 67 MPAFFSINAIETTNKADDTQWLTYYLVTSFLNVIEYWSQLILYY 110
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 335 SKIVVPGDSSEGPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLH 484
+ I+ PGDS + +A+ ++ G + LVAS R + +++H
Sbjct: 527 ASILSPGDSQAVIVPHAIRIISGPLGLVHPDPLVASHARSSMQTIESLIH 576
>SPAC1F5.08c |yam8|ehs1|calcium transport
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 417 VEGVSPLTTYSAL*IGPSLESPGTTI 340
++G+ P TY+A + P++ PG T+
Sbjct: 249 LKGLDPNVTYTAYLVEPNIGQPGGTV 274
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 150 FGTPVNLYETSAIPSLFSARKV*LPRSVVLTDLNINWY 37
F P + + SA+PSL S ++ P+ + +N+Y
Sbjct: 75 FSIPSSSHHPSAVPSLLSQHRLQQPQPRLYPSAPLNYY 112
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,062,318
Number of Sequences: 5004
Number of extensions: 63569
Number of successful extensions: 176
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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