Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22m15
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 34 0.12
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 34 0.12
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 34 0.12
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 34 0.12
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 34 0.12
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 34 0.12
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 31 0.66
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 31 0.66
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.66
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.66
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 31 1.1
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 31 1.1
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 3.5
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 4.6
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 4.6
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 4.6
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 4.6
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 4.6
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 4.6
AF077531-7|AAL27240.1| 418|Caenorhabditis elegans Gex interacti... 28 6.1
AF077531-6|AAC64616.2| 408|Caenorhabditis elegans Gex interacti... 28 6.1
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 TYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPAL---NKASPTGF 205
T +L+ +T D GNY N G+A+ LT VP+ + K+ L N T
Sbjct: 4072 TQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVVPS-ETLKIKKGLTDVNVTQGTKI 4130
Query: 206 TLVWEVDSYSTIIEYY 253
L EV+ +++Y
Sbjct: 4131 LLSVEVEGKPKTVKWY 4146
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVS 127
+ L+ + TTD G YT +A N G A+ S
Sbjct: 3245 FTLVVKQAATTDAGKYTAKASNPAGTAESS 3274
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFK--VDPALNKASPTGFTL 211
Y L S D G+Y N+ G A+ S K+T P I K D ++ + F++
Sbjct: 4645 YVLEIPSSVVEDTGDYKVEVANEAGSANSSGKITVEPKITFLKPLKDQSITEGENAEFSV 4704
Query: 212 VWEVDSYSTIIEYY 253
E ++ I+++Y
Sbjct: 4705 --ETNTKPRIVKWY 4716
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 TYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPAL---NKASPTGF 205
T +L+ +T D GNY N G+A+ LT VP+ + K+ L N T
Sbjct: 3432 TQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVVPS-ETLKIKKGLTDVNVTQGTKI 3490
Query: 206 TLVWEVDSYSTIIEYY 253
L EV+ +++Y
Sbjct: 3491 LLSVEVEGKPKTVKWY 3506
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVS 127
+ L+ + TTD G YT +A N G A+ S
Sbjct: 2605 FTLVVKQAATTDAGKYTAKASNPAGTAESS 2634
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFK--VDPALNKASPTGFTL 211
Y L S D G+Y N+ G A+ S K+T P I K D ++ + F++
Sbjct: 4005 YVLEIPSSVVEDTGDYKVEVANEAGSANSSGKITVEPKITFLKPLKDQSITEGENAEFSV 4064
Query: 212 VWEVDSYSTIIEYY 253
E ++ I+++Y
Sbjct: 4065 --ETNTKPRIVKWY 4076
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 TYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPAL---NKASPTGF 205
T +L+ +T D GNY N G+A+ LT VP+ + K+ L N T
Sbjct: 4072 TQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVVPS-ETLKIKKGLTDVNVTQGTKI 4130
Query: 206 TLVWEVDSYSTIIEYY 253
L EV+ +++Y
Sbjct: 4131 LLSVEVEGKPKTVKWY 4146
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVS 127
+ L+ + TTD G YT +A N G A+ S
Sbjct: 3245 FTLVVKQAATTDAGKYTAKASNPAGTAESS 3274
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFK--VDPALNKASPTGFTL 211
Y L S D G+Y N+ G A+ S K+T P I K D ++ + F++
Sbjct: 4645 YVLEIPSSVVEDTGDYKVEVANEAGSANSSGKITVEPKITFLKPLKDQSITEGENAEFSV 4704
Query: 212 VWEVDSYSTIIEYY 253
E ++ I+++Y
Sbjct: 4705 --ETNTKPRIVKWY 4716
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 TYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPAL---NKASPTGF 205
T +L+ +T D GNY N G+A+ LT VP+ + K+ L N T
Sbjct: 4072 TQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVVPS-ETLKIKKGLTDVNVTQGTKI 4130
Query: 206 TLVWEVDSYSTIIEYY 253
L EV+ +++Y
Sbjct: 4131 LLSVEVEGKPKTVKWY 4146
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVS 127
+ L+ + TTD G YT +A N G A+ S
Sbjct: 3245 FTLVVKQAATTDAGKYTAKASNPAGTAESS 3274
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFK--VDPALNKASPTGFTL 211
Y L S D G+Y N+ G A+ S K+T P I K D ++ + F++
Sbjct: 4645 YVLEIPSSVVEDTGDYKVEVANEAGSANSSGKITVEPKITFLKPLKDQSITEGENAEFSV 4704
Query: 212 VWEVDSYSTIIEYY 253
E ++ I+++Y
Sbjct: 4705 --ETNTKPRIVKWY 4716
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 TYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPAL---NKASPTGF 205
T +L+ +T D GNY N G+A+ LT VP+ + K+ L N T
Sbjct: 3432 TQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVVPS-ETLKIKKGLTDVNVTQGTKI 3490
Query: 206 TLVWEVDSYSTIIEYY 253
L EV+ +++Y
Sbjct: 3491 LLSVEVEGKPKTVKWY 3506
Score = 30.7 bits (66), Expect = 1.1
Identities = 49/200 (24%), Positives = 72/200 (36%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPALNK 187
RV + +LI DLG Y A N+ G S +L S P
Sbjct: 6933 RVTIEQDNNVARLILNHAAPYDLGEYVCTAINEYGTDKSSCRLIS-GETPSRPGRPEAEL 6991
Query: 188 ASPTGFTLVWEVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASIWSKIVVPGDSSE 367
+S T + WE T +E + +Y D DP W + SE
Sbjct: 6992 SSDTEIFIQWEAPEGPTYLEGITYRLEYRVAGPNDHGDP---------WITV------SE 7036
Query: 368 GPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISP 547
I + +V+ L+P +Y+ V ++N FG S G G +D S
Sbjct: 7037 -KIDDESVIVKHLSPLGIYQFRVTAQNGFGLGLPSLSSRIVQTHGKGAPKLQIDVLK-SE 7094
Query: 548 ILEDIETEPQNISQAQIFGI 607
I ++ + PQ S Q+ GI
Sbjct: 7095 IRLNVVSMPQK-STNQLGGI 7113
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVS 127
+ L+ + TTD G YT +A N G A+ S
Sbjct: 2605 FTLVVKQAATTDAGKYTAKASNPAGTAESS 2634
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFK--VDPALNKASPTGFTL 211
Y L S D G+Y N+ G A+ S K+T P I K D ++ + F++
Sbjct: 4005 YVLEIPSSVVEDTGDYKVEVANEAGSANSSGKITVEPKITFLKPLKDQSITEGENAEFSV 4064
Query: 212 VWEVDSYSTIIEYY 253
E ++ I+++Y
Sbjct: 4065 --ETNTKPRIVKWY 4076
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 TYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPAL---NKASPTGF 205
T +L+ +T D GNY N G+A+ LT VP+ + K+ L N T
Sbjct: 4072 TQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVVPS-ETLKIKKGLTDVNVTQGTKI 4130
Query: 206 TLVWEVDSYSTIIEYY 253
L EV+ +++Y
Sbjct: 4131 LLSVEVEGKPKTVKWY 4146
Score = 30.7 bits (66), Expect = 1.1
Identities = 49/200 (24%), Positives = 72/200 (36%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPALNK 187
RV + +LI DLG Y A N+ G S +L S P
Sbjct: 7573 RVTIEQDNNVARLILNHAAPYDLGEYVCTAINEYGTDKSSCRLIS-GETPSRPGRPEAEL 7631
Query: 188 ASPTGFTLVWEVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASIWSKIVVPGDSSE 367
+S T + WE T +E + +Y D DP W + SE
Sbjct: 7632 SSDTEIFIQWEAPEGPTYLEGITYRLEYRVAGPNDHGDP---------WITV------SE 7676
Query: 368 GPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISP 547
I + +V+ L+P +Y+ V ++N FG S G G +D S
Sbjct: 7677 -KIDDESVIVKHLSPLGIYQFRVTAQNGFGLGLPSLSSRIVQTHGKGAPKLQIDVLK-SE 7734
Query: 548 ILEDIETEPQNISQAQIFGI 607
I ++ + PQ S Q+ GI
Sbjct: 7735 IRLNVVSMPQK-STNQLGGI 7753
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVS 127
+ L+ + TTD G YT +A N G A+ S
Sbjct: 3245 FTLVVKQAATTDAGKYTAKASNPAGTAESS 3274
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 YQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFK--VDPALNKASPTGFTL 211
Y L S D G+Y N+ G A+ S K+T P I K D ++ + F++
Sbjct: 4645 YVLEIPSSVVEDTGDYKVEVANEAGSANSSGKITVEPKITFLKPLKDQSITEGENAEFSV 4704
Query: 212 VWEVDSYSTIIEYY 253
E ++ I+++Y
Sbjct: 4705 --ETNTKPRIVKWY 4716
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLG 112
R+ G YQL+ R V D G YT AEN+ G
Sbjct: 1242 RIQMKCDGVNYQLLVRDVGLEDEGTYTITAENEKG 1276
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 395 VRGLTPSTVYEALVASRNRFG---WSKLSAVLHFATEPGVGNTP 517
++GLTP+T Y VA +N+ G WS++++ L A+ VG P
Sbjct: 1368 IKGLTPNTEYIFRVAGKNKQGLGEWSEMTSTLKTAS---VGQAP 1408
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLG 112
R+ G YQL+ R V D G YT AEN+ G
Sbjct: 1257 RIQMKCDGVNYQLLVRDVGLEDEGTYTITAENEKG 1291
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 395 VRGLTPSTVYEALVASRNRFG---WSKLSAVLHFATEPGVGNTP 517
++GLTP+T Y VA +N+ G WS++++ L A+ VG P
Sbjct: 1383 IKGLTPNTEYIFRVAGKNKQGLGEWSEMTSTLKTAS---VGQAP 1423
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLG 112
R+ G YQL+ R V D G YT AEN+ G
Sbjct: 17068 RIQMKCDGVNYQLLVRDVGLEDEGTYTITAENEKG 17102
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 395 VRGLTPSTVYEALVASRNRFG---WSKLSAVLHFATEPGVGNTP 517
++GLTP+T Y VA +N+ G WS++++ L A+ VG P
Sbjct: 17194 IKGLTPNTEYIFRVAGKNKQGLGEWSEMTSTLKTAS---VGQAP 17234
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLG 112
R+ G YQL+ R V D G YT AEN+ G
Sbjct: 17083 RIQMKCDGVNYQLLVRDVGLEDEGTYTITAENEKG 17117
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 395 VRGLTPSTVYEALVASRNRFG---WSKLSAVLHFATEPGVGNTP 517
++GLTP+T Y VA +N+ G WS++++ L A+ VG P
Sbjct: 17209 IKGLTPNTEYIFRVAGKNKQGLGEWSEMTSTLKTAS---VGQAP 17249
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 30.7 bits (66), Expect = 1.1
Identities = 49/200 (24%), Positives = 72/200 (36%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPALNK 187
RV + +LI DLG Y A N+ G S +L S P
Sbjct: 921 RVTIEQDNNVARLILNHAAPYDLGEYVCTAINEYGTDKSSCRLIS-GETPSRPGRPEAEL 979
Query: 188 ASPTGFTLVWEVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASIWSKIVVPGDSSE 367
+S T + WE T +E + +Y D DP W + SE
Sbjct: 980 SSDTEIFIQWEAPEGPTYLEGITYRLEYRVAGPNDHGDP---------WITV------SE 1024
Query: 368 GPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISP 547
I + +V+ L+P +Y+ V ++N FG S G G +D S
Sbjct: 1025 -KIDDESVIVKHLSPLGIYQFRVTAQNGFGLGLPSLSSRIVQTHGKGAPKLQIDVLK-SE 1082
Query: 548 ILEDIETEPQNISQAQIFGI 607
I ++ + PQ S Q+ GI
Sbjct: 1083 IRLNVVSMPQK-STNQLGGI 1101
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 30.7 bits (66), Expect = 1.1
Identities = 49/200 (24%), Positives = 72/200 (36%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPALNK 187
RV + +LI DLG Y A N+ G S +L S P
Sbjct: 885 RVTIEQDNNVARLILNHAAPYDLGEYVCTAINEYGTDKSSCRLIS-GETPSRPGRPEAEL 943
Query: 188 ASPTGFTLVWEVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASIWSKIVVPGDSSE 367
+S T + WE T +E + +Y D DP W + SE
Sbjct: 944 SSDTEIFIQWEAPEGPTYLEGITYRLEYRVAGPNDHGDP---------WITV------SE 988
Query: 368 GPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISP 547
I + +V+ L+P +Y+ V ++N FG S G G +D S
Sbjct: 989 -KIDDESVIVKHLSPLGIYQFRVTAQNGFGLGLPSLSSRIVQTHGKGAPKLQIDVLK-SE 1046
Query: 548 ILEDIETEPQNISQAQIFGI 607
I ++ + PQ S Q+ GI
Sbjct: 1047 IRLNVVSMPQK-STNQLGGI 1065
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 30.7 bits (66), Expect = 1.1
Identities = 49/200 (24%), Positives = 72/200 (36%)
Frame = +2
Query: 8 RVLSIAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKLTGVPNIASFKVDPALNK 187
RV + +LI DLG Y A N+ G S +L S P
Sbjct: 888 RVTIEQDNNVARLILNHAAPYDLGEYVCTAINEYGTDKSSCRLIS-GETPSRPGRPEAEL 946
Query: 188 ASPTGFTLVWEVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASIWSKIVVPGDSSE 367
+S T + WE T +E + +Y D DP W + SE
Sbjct: 947 SSDTEIFIQWEAPEGPTYLEGITYRLEYRVAGPNDHGDP---------WITV------SE 991
Query: 368 GPIHNALYVVRGLTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISP 547
I + +V+ L+P +Y+ V ++N FG S G G +D S
Sbjct: 992 -KIDDESVIVKHLSPLGIYQFRVTAQNGFGLGLPSLSSRIVQTHGKGAPKLQIDVLK-SE 1049
Query: 548 ILEDIETEPQNISQAQIFGI 607
I ++ + PQ S Q+ GI
Sbjct: 1050 IRLNVVSMPQK-STNQLGGI 1068
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 440 SRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISPILEDIETEPQNISQAQIF 601
SRN + W+K + VL+ + GVG + + Y++ + +D+ T +N + + F
Sbjct: 1626 SRNPYSWNKFANVLYLESPIGVGYSYA---YNNTNIQYDDVTTAQENYAALKSF 1676
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 440 SRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISPILEDIETEPQNISQAQIF 601
SRN + W+K + VL+ + GVG + + Y++ + +D+ T +N + + F
Sbjct: 1626 SRNPYSWNKFANVLYLESPIGVGYSYA---YNNTNIQYDDVTTAQENYAALKSF 1676
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 440 SRNRFGWSKLSAVLHFATEPGVGNTPSVVDYSDISPILEDIETEPQNISQAQIF 601
SRN + W+K + VL+ + GVG + + Y++ + +D+ T +N + + F
Sbjct: 1626 SRNPYSWNKFANVLYLESPIGVGYSYA---YNNTNIQYDDVTTAQENYAALKSF 1676
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 20 IAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKL 136
+ +G Y+L F ++ +TD G Y A+N +G A +L
Sbjct: 3981 VEEGGAYKLKFSNIISTDAGIYEIVAKNGVGEARCKARL 4019
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 20 IAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKL 136
+ +G Y+L F ++ +TD G Y A+N +G A +L
Sbjct: 3934 VEEGGAYKLKFSNIISTDAGIYEIVAKNGVGEARCKARL 3972
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -2
Query: 653 VRYTISYNYYYQRNRKFRISELVRCSVA 570
+++TI+Y+Y+ QR+R+ + LV S+A
Sbjct: 1 MKFTINYSYFLQRDRQQQQQALVEASLA 28
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 20 IAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKL 136
+ +G Y+L F ++ +TD G Y A+N +G A +L
Sbjct: 4219 VEEGGAYKLKFSNIISTDAGIYEIVAKNGVGEARCKARL 4257
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -2
Query: 653 VRYTISYNYYYQRNRKFRISELVRCSVA 570
+++TI+Y+Y+ QR+R+ + LV S+A
Sbjct: 1 MKFTINYSYFLQRDRQQQQQALVEASLA 28
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 20 IAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKL 136
+ +G Y+L F ++ +TD G Y A+N +G A +L
Sbjct: 4219 VEEGGAYKLKFSNIISTDAGIYEIVAKNGVGEARCKARL 4257
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = -2
Query: 653 VRYTISYNYYYQRNRKFRISELVRCSVA 570
+++TI+Y+Y+ QR+R+ + LV S+A
Sbjct: 1 MKFTINYSYFLQRDRQQQQQALVEASLA 28
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 20 IAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKL 136
+ +G Y+L F ++ +TD G Y A+N +G A +L
Sbjct: 4178 VEEGGAYKLKFSNIISTDAGIYEIVAKNGVGEARCKARL 4216
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 20 IAQGSTYQLIFRSVRTTDLGNYTFRAENKLGMADVSYKL 136
+ +G Y+L F ++ +TD G Y A+N +G A +L
Sbjct: 3950 VEEGGAYKLKFSNIISTDAGIYEIVAKNGVGEARCKARL 3988
>AF077531-7|AAL27240.1| 418|Caenorhabditis elegans Gex interacting
protein protein10, isoform b protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 218 EVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASI 331
E D Y +Y R YY RP D+PD + D S+
Sbjct: 260 EQDDYD--FSHYTTARPYYSRPNRDDPDYFDFDLQHSV 295
>AF077531-6|AAC64616.2| 408|Caenorhabditis elegans Gex interacting
protein protein10, isoform a protein.
Length = 408
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 218 EVDSYSTIIEYYLWIRQYYGRPATDEPDPLNTDPSASI 331
E D Y +Y R YY RP D+PD + D S+
Sbjct: 260 EQDDYD--FSHYTTARPYYSRPNRDDPDYFDFDLQHSV 295
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 404 LTPSTVYEALVASRNRFGWSKLSAVLHFATEPGVGN-TPSVV 526
L+PST Y + + N FG S A L F TE V N +PS +
Sbjct: 301 LSPSTDYALAIEADNGFGTSP-QATLVFHTEDSVPNWSPSTI 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,164,581
Number of Sequences: 27780
Number of extensions: 371970
Number of successful extensions: 1165
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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