Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc22l19
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 209 3e-55
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 151 1e-37
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 145 7e-36
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 131 9e-32
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 113 2e-26
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 102 7e-23
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 102 7e-23
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 100 3e-22
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 99 3e-22
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 93 4e-20
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 89 9e-19
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 87 3e-18
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 85 1e-17
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 83 3e-17
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 83 4e-17
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 81 2e-16
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 77 2e-15
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 77 3e-15
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 77 4e-15
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 73 5e-14
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 65 1e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 64 3e-11
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 60 3e-10
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 57 2e-09
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 54 2e-08
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 54 2e-08
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 53 4e-08
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 51 2e-07
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 50 4e-07
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 36 0.009
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.32
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 30 0.42
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 28 1.3
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 28 1.7
SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1 |Schiz... 27 2.3
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 27 3.9
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 5.2
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 6.9
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||... 26 6.9
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 26 6.9
SPCC4F11.04c |||mannosyltransferase complex subunit |Schizosacch... 26 6.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.1
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 25 9.1
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 25 9.1
SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase Gpd3|... 25 9.1
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 209 bits (511), Expect = 3e-55
Identities = 94/184 (51%), Positives = 140/184 (76%)
Frame = +3
Query: 3 LGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETK 182
L DYIQ+ +GSL L+A+HNI QIV++ +K +L ++E+ + ++ K +IF TK
Sbjct: 322 LNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDN--KVLIFTGTK 379
Query: 183 RKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK 362
R A++I+R +R+ GWPA+ +HGDK Q ERD VL +F+ G++ I+VATDVA+RG+DV GI
Sbjct: 380 RVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGIT 439
Query: 363 YVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQL 542
+V N+D+P ++EDY+HRIGRTGR+ +KGT+Y +FT N++QA++LVS+L EA Q I P+L
Sbjct: 440 HVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKL 499
Query: 543 QSMA 554
+ MA
Sbjct: 500 EEMA 503
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 151 bits (365), Expect = 1e-37
Identities = 79/184 (42%), Positives = 117/184 (63%)
Frame = +3
Query: 3 LGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETK 182
L DY+ +++G + S + NI Q V ++ EK + L +L + P T+IFVETK
Sbjct: 386 LKDYVFLSVGRVG-STSENITQKVVHVEDSEKRSYLLDILHTL----PPEGLTLIFVETK 440
Query: 183 RKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK 362
R A+ ++ + +PA +HGD+TQ+ER+ L F+ GR SI+VAT VA+RGLD+ +
Sbjct: 441 RMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVT 500
Query: 363 YVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQL 542
+VIN+D P +DY+HRIGRTGR+ + G + AFF +N AK+L+ +LQEANQ L
Sbjct: 501 HVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFL 560
Query: 543 QSMA 554
+MA
Sbjct: 561 IAMA 564
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 145 bits (351), Expect = 7e-36
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 1/177 (0%)
Frame = +3
Query: 3 LGDYIQINIGSLQLSANHNILQIVDICQE-HEKENKLNVLLQEIGQSQEPGAKTIIFVET 179
L D ++I IGS +L+A+ NI QIV+I + KE L+ LL++ S K +IFV
Sbjct: 367 LKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLY 426
Query: 180 KRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGI 359
K++A + + R + V +HGD +Q R + L FK G+ +LVATDVAARGLD+ +
Sbjct: 427 KKEAARVEGTLARK-YNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKV 485
Query: 360 KYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMI 530
+ VIN +P + EDY+HRIGRTGR+ +KGT+ FFTP + A +LV+VL++A Q I
Sbjct: 486 QLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDI 542
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 131 bits (317), Expect = 9e-32
Identities = 62/182 (34%), Positives = 109/182 (59%)
Frame = +3
Query: 15 IQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 194
++I +G + A+ + QIV++ E K ++L LL E+ +Q +T++FV+ + A+
Sbjct: 625 VEITVGGRSVVASE-VEQIVEVRPEESKFSRLLELLGELYNNQLD-VRTLVFVDRQESAD 682
Query: 195 NISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
+ ++ + G+ + +HG K Q +RD + +K G +L+AT V ARGLDV ++ V+N
Sbjct: 683 ALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVN 742
Query: 375 FDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMA 554
+D PN EDY+HR+GRTGR+ G + F TP + A D+ L+ + Q + +LQ++A
Sbjct: 743 YDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLA 802
Query: 555 DR 560
+
Sbjct: 803 SQ 804
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 113 bits (273), Expect = 2e-26
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Frame = +3
Query: 15 IQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 194
+ + IG++ + + + Q V++ + K+ + ++EI +S IIFV KR E
Sbjct: 475 VMLTIGNIGQAVDR-VEQRVEMISDDSKKWRR---VEEILESNRFSPPIIIFVNLKRNIE 530
Query: 195 NISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
I++ + GW AV +HG K+Q++R+ + Q + A ILVATD+A RG+D+ + V+N
Sbjct: 531 AIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLN 590
Query: 375 FDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDL-VSVLQEANQMISPQLQS 548
++ S EDY HRIGRTGR+ GT+ F P ++ DL V + + A I +L++
Sbjct: 591 YNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPDELRN 649
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 102 bits (244), Expect = 7e-23
Identities = 53/156 (33%), Positives = 84/156 (53%)
Frame = +3
Query: 54 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPA 233
H + Q +E K K+N LL + +Q +IFV++ +A + R +R +P+
Sbjct: 268 HGLQQHYVKLEEKAKNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPS 322
Query: 234 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 413
+C+HG Q+ER + FK+ I VATDV RG+D++ + VIN+D P+S + Y+HR
Sbjct: 323 ICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHR 382
Query: 414 IGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEAN 521
+GR GR +KG + F + Q D + E N
Sbjct: 383 VGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVN 418
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 102 bits (244), Expect = 7e-23
Identities = 43/114 (37%), Positives = 72/114 (63%)
Frame = +3
Query: 156 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 335
+ +IF ++RK + ++ +R + MHG+ Q+ERD ++ F++G + +L+ TD+ A
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWA 321
Query: 336 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDL 497
RG+DV + VIN+D P + E+YIHRIGR+GR KG + F T + R +D+
Sbjct: 322 RGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDI 375
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 100 bits (239), Expect = 3e-22
Identities = 48/135 (35%), Positives = 81/135 (60%)
Frame = +3
Query: 114 VLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFK 293
V+L+++ + E + +IFV+ +A+ + + +HG+ Q +R+E L +F+
Sbjct: 276 VILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFR 335
Query: 294 EGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPS 473
+G +L+ATD+ ARG+D G+K VINFD+P S YIHRIGRTGR+ + G + FFT
Sbjct: 336 KGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKE 395
Query: 474 NSRQAKDLVSVLQEA 518
+ K + V++ +
Sbjct: 396 DGEYIKLIAGVMRSS 410
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 99 bits (238), Expect = 3e-22
Identities = 44/114 (38%), Positives = 70/114 (61%)
Frame = +3
Query: 156 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 335
+ +IF T+RK + ++ + + MHGD Q +RD ++++F+ G + IL+ TD+ A
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319
Query: 336 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDL 497
RG+DV + VIN+D P + E+YIHRIGR GR KG S F T + R +++
Sbjct: 320 RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI 373
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 93.1 bits (221), Expect = 4e-20
Identities = 47/106 (44%), Positives = 62/106 (58%)
Frame = +3
Query: 150 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDV 329
G IIF T + ++ +R G+ A+ +HG +Q R L +FK G S LVATDV
Sbjct: 285 GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDV 344
Query: 330 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 467
AARGLD+ + VIN+D P S+ YIHR+GRT R+ G S A T
Sbjct: 345 AARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVT 390
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 88.6 bits (210), Expect = 9e-19
Identities = 46/102 (45%), Positives = 60/102 (58%)
Frame = +3
Query: 162 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARG 341
IIFV R AE I +R +H + Q+ER L +F+ A ILVATDVA+RG
Sbjct: 262 IIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRG 321
Query: 342 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 467
LD+ ++ VINFD P +DYIHR+GRT R+ G S + T
Sbjct: 322 LDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVT 363
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 86.6 bits (205), Expect = 3e-18
Identities = 42/136 (30%), Positives = 72/136 (52%)
Frame = +3
Query: 60 ILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVC 239
+ Q E +K + LN L ++ +Q +IIF + + E +++ I G+
Sbjct: 256 VTQYYAFVDESQKVHCLNTLFSKLQINQ-----SIIFCNSTNRVELLAKKITELGYSCFY 310
Query: 240 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 419
H Q R+ V + F+ G LV +D+ RG+D+ + VINFD+P ++E Y+HRIG
Sbjct: 311 SHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIG 370
Query: 420 RTGRSKSKGTSYAFFT 467
R+GR +G + +F +
Sbjct: 371 RSGRFGHRGLAISFIS 386
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 84.6 bits (200), Expect = 1e-17
Identities = 50/178 (28%), Positives = 94/178 (52%)
Frame = +3
Query: 24 NIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENIS 203
+I L L N +I ++ +++ L + L+ +S P + T++FV TK E +S
Sbjct: 306 DIIKLPLKDNVRPREIGNVNNPKKRKRALELALKG-SESGSPDS-TLVFVPTKHHVEYVS 363
Query: 204 RNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDY 383
+ + G+ ++G Q+ R + F+ G+ ++LV TDVA+RG+D+ + VIN+D+
Sbjct: 364 ELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGIDIPLLANVINYDF 423
Query: 384 PNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMISPQLQSMAD 557
P + ++HR+GRT R+ G +Y+ ++ DL L S Q+++ +D
Sbjct: 424 PPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLFLNRPLVTSSKQVKTDSD 481
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 83.4 bits (197), Expect = 3e-17
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Frame = +3
Query: 18 QINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAEN 197
+I + + +LS I Q+ CQ +E+K NVL++ G ++IIF + K AE
Sbjct: 313 EIRLKTEELSVE-GIKQLYMDCQS--EEHKYNVLVELYGLLTI--GQSIIFCKKKDTAEE 367
Query: 198 ISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINF 377
I+R + G C+ G+ +RD ++ F+ G + +LV T+V ARG+DV + V+N+
Sbjct: 368 IARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNY 427
Query: 378 DYP------NSSEDYIHRIGRTGRSKSKGTSYAF 461
D P + Y+HRIGRTGR G S F
Sbjct: 428 DMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINF 461
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 83.0 bits (196), Expect = 4e-17
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +3
Query: 156 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 335
K I+F+ + + ++ + P + +HG + QQ R ++F IL+ T+VAA
Sbjct: 338 KVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAA 397
Query: 336 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR-SKSKGTSYAFFTPS 473
RGLD+ + +++ +D P+ DYIHR+GRT R +K G S F PS
Sbjct: 398 RGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAPS 444
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 80.6 bits (190), Expect = 2e-16
Identities = 38/97 (39%), Positives = 60/97 (61%)
Frame = +3
Query: 156 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 335
+TIIF +K A + A +HG +Q++R L F++G+ + L+ATDVA+
Sbjct: 506 RTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVAS 565
Query: 336 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 446
RG+D+ GI+ VIN++ P + E Y+HR+GRT R+ G
Sbjct: 566 RGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSG 602
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 77.4 bits (182), Expect = 2e-15
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +3
Query: 156 KTIIFVETKRKAENISRNIRRY--GWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDV 329
KTI+F+ + ++ + RR G + +HG + Q R EV +F R +L TD+
Sbjct: 285 KTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDI 344
Query: 330 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVS 503
ARGLD + +VI D P + YIHR+GRT R G + PS K L S
Sbjct: 345 VARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRLES 402
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 77.0 bits (181), Expect = 3e-15
Identities = 39/117 (33%), Positives = 63/117 (53%)
Frame = +3
Query: 147 PGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATD 326
PG KT++F + I+ + P+ +H Q++R + L +FK +LV TD
Sbjct: 389 PG-KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTD 447
Query: 327 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDL 497
VAARG+D+ + +VI++ P++++ Y+HR GRT R+ G S P Q K L
Sbjct: 448 VAARGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILMCGPKELSQLKRL 504
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 76.6 bits (180), Expect = 4e-15
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = +3
Query: 117 LLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY-GWPAVCMHGDKTQQERDEVLYQFK 293
LLQ++ S P ++ I+F+ T + + + + P +H T +R + F+
Sbjct: 282 LLQQL-TSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFR 340
Query: 294 EGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSY 455
+ ++ IL ATDV ARG+D I V+ P++++DYIHRIGRTGR+ G +Y
Sbjct: 341 KCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY 394
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 72.9 bits (171), Expect = 5e-14
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = +3
Query: 240 MHGDKTQQERDEVLYQFKEGRAS---ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 410
+HG +QQ R L F S IL+ TDVAARGLD+ + V+ +D P S++DY+H
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 411 RIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMISP 536
RIGRT R+ G + F P S L S + AN + P
Sbjct: 533 RIGRTARAGHNGAAIMFLLPKESEYINLLKSSV-SANILEQP 573
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 64.9 bits (151), Expect = 1e-11
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 156 KTIIFVETKRKAENISRNIRRYGWP--AVCMHGDKTQQERDEVLYQFKEG-RASILVATD 326
K I+F + E + Y P V +HG + Q R +FK+ + ++L TD
Sbjct: 258 KAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTD 317
Query: 327 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSV 506
+A+RGLD+ + +V+ D P + + HR GR GR+ G + + ++L+ V
Sbjct: 318 IASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEELLRV 377
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 63.7 bits (148), Expect = 3e-11
Identities = 30/86 (34%), Positives = 49/86 (56%)
Frame = +3
Query: 255 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 434
++ ER +++ +F G ++LV +D+ ARG+DV + VIN+D P S Y+HRIGRT R+
Sbjct: 472 SRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARA 531
Query: 435 KSKGTSYAFFTPSNSRQAKDLVSVLQ 512
+G ++ LV L+
Sbjct: 532 GREGFAWTLVQSHEGHHFSKLVKQLR 557
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 60.1 bits (139), Expect = 3e-10
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Frame = +3
Query: 90 HEKENKLNVLLQE-IGQSQEPGAKTIIFVETKRKAENISRNIRRY----------GWPAV 236
H K L ++ E + Q + +IFVE + AE I R + ++ G AV
Sbjct: 411 HPKLEHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAV 470
Query: 237 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 416
+Q+ ++E + QF++G + L+AT + GLD+ + +I +D S + R+
Sbjct: 471 RKAAGMSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRM 530
Query: 417 GRTGRSKSKGTSYAFFTPSNS----RQAKDLVSVLQE 515
GRTGR K KG Y T +AKD LQ+
Sbjct: 531 GRTGR-KRKGYIYMLLTRGKEEAKWERAKDAYRTLQD 566
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 57.2 bits (132), Expect = 2e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 333 ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSN 476
ARGLD + + V+NFD P++++ YIHRIGRT R+ GT+ +F P +
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFVVPKS 434
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +3
Query: 144 EPGAKTIIFVETKRKAENISRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFKE--GRA 305
E + IIF TK+ E I R + + + V ++ GD + +ER F+ G+
Sbjct: 1413 EGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKT 1472
Query: 306 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNS 479
I++AT G++ G++ V+++ P SS DY+ GR GR + F+ +S
Sbjct: 1473 RIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDS 1530
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 54.0 bits (124), Expect = 2e-08
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +3
Query: 144 EPGAKTIIFVETKRKAENISRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFKE--GRA 305
E + IIF TK+ E I R + + + V ++ GD + +ER F+ G+
Sbjct: 1413 EGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKT 1472
Query: 306 SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNS 479
I++AT G++ G++ V+++ P SS DY+ GR GR + F+ +S
Sbjct: 1473 RIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDS 1530
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 53.2 bits (122), Expect = 4e-08
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +3
Query: 162 IIFVETKRKAENISRNIRR-YGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAAR 338
II+ ++ E ++ +R YG A H + ER + +++ G I+VAT
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 339 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 467
G+D +++VI+ +P S E Y GR GR F++
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 50.8 bits (116), Expect = 2e-07
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Frame = +3
Query: 54 HNILQIVDICQEHEKENKLNVLLQEIGQSQEPG---AKTIIFVETKRKAENISRNIRRY- 221
HN +Q + + H K N L LL+E + G + +IF E + AE I+ +
Sbjct: 438 HNKIQGLSL--NHPKMNHLLELLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTTLLAIR 495
Query: 222 ---------GWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
G Q ++ E + QF+ G + LVAT + GLD+ +I
Sbjct: 496 PMVRASLFIGQANSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIIC 555
Query: 375 FDYPNSSEDYIHRIGRTGRSKS 440
+D +S I R+GRTGR KS
Sbjct: 556 YDASSSPIRTIQRMGRTGRKKS 577
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 50.0 bits (114), Expect = 4e-07
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Frame = +3
Query: 45 SANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYG 224
S N + + D +K KL LL+ + + +T+IFVE K A +S ++
Sbjct: 327 SDNGPRIPVFDSTDVTDKVFKLLELLKATYRKSD-SVRTVIFVERKATAFTLSLFMKTLN 385
Query: 225 WPAVCMH-----GDKTQQE-------RDEVLYQFKEGRASILVATDVAARGLDVDGIKYV 368
P + H G Q E + + L++FK G+ ++L+AT VA G+DV V
Sbjct: 386 LPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLV 445
Query: 369 INFDYPNSSEDYIHRIGRTGRSKSK 443
I F+ + Y+ GR SK
Sbjct: 446 IRFNICRTVTQYVQSRGRARAMASK 470
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 255 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 431
T QER ++ + G+ ++AT+ G+D+ + VI +P S + + GR GR
Sbjct: 595 TVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGR 653
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 30.3 bits (65), Expect = 0.32
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 384 PNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQMISP 536
P SS+ + I K + F PSNS KDL +V ++ N++ SP
Sbjct: 246 PLSSQQILPAISNNTSEKPDSNNCGFLLPSNSTSIKDLKNV-KKGNRLNSP 295
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 29.9 bits (64), Expect = 0.42
Identities = 21/112 (18%), Positives = 51/112 (45%)
Frame = +3
Query: 39 QLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRR 218
Q A++ ++ + Q H E ++L+ GQ + + I++ +K ++I +
Sbjct: 697 QPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELV-- 754
Query: 219 YGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
+ ++ + + + G +++AT++A L +DGI YV++
Sbjct: 755 ----ILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 297 GRASILVATDVAARGLDVDGIKYVINFDY 383
G ++VAT++A L V GI YV++ Y
Sbjct: 757 GVRKVVVATNIAETSLTVHGISYVVDTGY 785
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 255 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
T +++ +V EG +VAT+VA + + I+YV++
Sbjct: 712 TTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVD 751
>SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 764 HNIYLYYEDSPS*KCQQKSYLIVVKSFVTTAPPLATLA 651
H+IY+ S C + YL ++ + V TA PL+ +A
Sbjct: 330 HDIYIAGISSVHNVCPKGYYLAIISTIVETANPLSEIA 367
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +3
Query: 240 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
+H T E+ V + ++ +T++A + +DGI YV++
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 347 IKPSSCNISCYKNTSTTFLELIQNFISFLLSFIAMHTNSWPAIS-PDVP 204
+ PSS S N+ ++ + I+N+IS +L +T+S AI P +P
Sbjct: 252 VLPSSITSSAKSNSRSSLSQKIRNYISNMLFDAISYTDSCLAIHLPFIP 300
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 6.9
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +3
Query: 309 ILVATDVAARGLDVDGIKYVIN 374
++++T++A L +DGI YV++
Sbjct: 354 VVISTNIAETSLTIDGIVYVVD 375
>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +3
Query: 309 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 470
+ VA RGL + I ++ + S Y H GR G G + F P
Sbjct: 474 VFVANPSEIRGLHLPSITHIFHLWSTFSGVAYQHIAGRLGAMGQTGKIFNFIIP 527
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 351 DGIKYVINFDYPNSS--EDYIHRIGRTGRSKSKGTSYAFFTPSNSRQ 485
DG K+V++ DYP+ + ++ H + + SK ++ + SN ++
Sbjct: 97 DGAKFVVSTDYPDPALIDNLEHNVKQYAEIASKISAVGYLWGSNIKE 143
>SPCC4F11.04c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 401 LHPSY-WENWTFKIKRNIICFLYPFKFP 481
LHP Y + WT ++ RN I YP+ P
Sbjct: 109 LHPDYEYILWTDEMSRNFIADNYPWFLP 136
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -1
Query: 329 NISCYKNTSTTFLELIQNFISFLLSFIAMHTNSWPAISPDV 207
N+S +K ++ + L+ F FL+ + ++N +S DV
Sbjct: 2302 NVSSFKGSTPSLWNLLNQFSKFLIEIASANSNIVYKLSYDV 2342
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.4 bits (53), Expect = 9.1
Identities = 20/99 (20%), Positives = 45/99 (45%)
Frame = +3
Query: 78 ICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKT 257
I Q H K ++L+ GQ + + +I +K+ N+ + A +
Sbjct: 295 IFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQI------QACPLFASLP 348
Query: 258 QQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 374
Q+++ +V ++++T++A + + GI+YVI+
Sbjct: 349 QEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 342 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 452
L +D + I YP S EDY + R SK S
Sbjct: 146 LIIDNLSMPIQLAYPTSPEDYAYLRLRRNTSKKSSLS 182
>SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase
Gpd3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 9.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 192 QLFSWFQQKLLFSHQVLDFVQFLA 121
+L SW+ + +SH+V+D V + A
Sbjct: 309 KLVSWYDNEWGYSHRVVDLVAYTA 332
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,956,417
Number of Sequences: 5004
Number of extensions: 58268
Number of successful extensions: 219
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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